| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0952 |
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| Symbol | |
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| ID | 4037749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1037621 |
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| End bp | 1038880 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637976333 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_583107 |
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| Protein GI | 94309897 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.553309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.40345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAC GTGACATGCT GAAGCTGTCG GCGGTGGCCG CCGCGGCGAT GATCGGTACC
AGCCCGCTGA TGGCGCAGAC CAAGGAGCCG ATCAAGGTCG GCATCCTGCA TTCGCTATCG
GGCACGATGG CCATCTCCGA AACGTCGCTC AAGGACGTGG CGCTGATGAC GATCGACGAG
ATCAACAAGA GCGGCGGCGT GCTGGGCCGC AAGCTCGAGC CCGTGGTGGT GGACCCCGCT
TCCAACTGGC CGCTCTTCGC GGAGAAGGCG CGTCAGCTCA TCACCAAGGA CAAGGTGGCG
GTCACGTTCG GATGCTGGAC GTCGGTATCG CGCAAGTCGG TGCTCCCGGT CTATGAGGAA
ACCAACGCGC TGCTGTTCTA CCCGGTGCAG TACGAAGGTG AGGAGATGTC GAAGAACGTG
TTTTACACGG GCGCGGCACC CAACCAGCAG GCGATCCCGG CGGTGGAATA CCTGATGAGC
AAGGAGGGCG GCGGTGCGAA GCGCTTCTTC CTGCTGGGTA CCGACTACGT CTATCCGCGC
ACTACCAACA AGATCCTGCG TGCGTTCCTG AAGAGCAAGG GCGTGGAGGA CAAGGACATC
GAAGAGGTTT ACACCCCGTT CGGTCATAGC GACTACCAGA CCATCGTCGC CAACATCAAG
AAGTTCTCGC AGGGTGGCAA GACCGCCGTG ATCTCCACGA TCAATGGCGA CTCGAACGTG
CCGTTCTACA AGGAACTCGG CAACGCCGGC CTGAAGGCCA AGGACGTGCC GGTGGTGGCC
TTCTCGGTGG GCGAGGAAGA ACTGCGCGGC ATCGACACCA AGCCGCTGGT GGGCCATCTG
GCTGCATGGA ACTACTTCAT GTCGGTCAAG AACCCCGAGA ACGAAGCGTT CAAAAAGCAG
TGGGCCGCGT GGGTCAAGGC CAACAACCTG CCGGGCGGCG ACAAGCGCGT GACCAACGAC
CCGATGGAAG CTACCTACGT GGGCATCCAT ATGTGGGCGC AGGCCGTGAA GAAGGCTGGC
AGCACCGATC CGGACAAGGT GCGTGCCGCG ATGTACGGCC AGACCTTCAA GGCGCCCGAT
GGCTTCACGC TGACGATGGG TGACAACCAC CATCTCTACA AGCCCGTGAT GATTGGCGAG
GTCAAGGGCG ACGGCCAGTT CTCGGTGGTG TGGAAGACGC CGAAGCCGGT CCGCGCGCAA
CCGTGGAGCC CGTTCATCGC CGGCAATGAA GGCAAGGCGG ACAAGGTGGC GGGGAACTGA
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| Protein sequence | MKRRDMLKLS AVAAAAMIGT SPLMAQTKEP IKVGILHSLS GTMAISETSL KDVALMTIDE
INKSGGVLGR KLEPVVVDPA SNWPLFAEKA RQLITKDKVA VTFGCWTSVS RKSVLPVYEE
TNALLFYPVQ YEGEEMSKNV FYTGAAPNQQ AIPAVEYLMS KEGGGAKRFF LLGTDYVYPR
TTNKILRAFL KSKGVEDKDI EEVYTPFGHS DYQTIVANIK KFSQGGKTAV ISTINGDSNV
PFYKELGNAG LKAKDVPVVA FSVGEEELRG IDTKPLVGHL AAWNYFMSVK NPENEAFKKQ
WAAWVKANNL PGGDKRVTND PMEATYVGIH MWAQAVKKAG STDPDKVRAA MYGQTFKAPD
GFTLTMGDNH HLYKPVMIGE VKGDGQFSVV WKTPKPVRAQ PWSPFIAGNE GKADKVAGN
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