Gene Rmet_0950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0950 
Symbol 
ID4037747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1036307 
End bp1036951 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content62% 
IMG OID637976331 
Productcytochrome c oxidase subunit III 
Protein accessionYP_583105 
Protein GI94309895 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID[TIGR02842] cytochrome o ubiquinol oxidase, subunit III 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.454047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.761675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACAG AAGTTCTTGA CCGCTTCGGG GCGAAAGCCC CCGCGCATGC GCACTCGCAC 
GACGAGGCGC ACGACCACGC GCATCACGAC ACCAGCGAGA ACACCGTCTT CGGTTTCTGG
CTGTACCTGA TGAGCGACTG CATCTTGTTC GCGTGCCTGT TCGCCGCCTT CGCCGTCCTG
CGCGGCGAAG TGGCGGGTGG CCCGTCGGGC AAGGAGATCT TCGAGCTCAA CTACGTGCTC
GTGGAAACCG CCATCCTGCT GTTCTCGTCG ATCACCTACG GCTTTGCCAT GGTGTCGATG
CAGAACCATC AGAAGGGCCG CGTGATGTTC TGGCTGGGCG TGACGTTCCT GCTGGGCGCC
GCGTTCATGG GCATGGAAAT CAACGAGTTC GCGCACCTGA TTCACGAGGG TGCCGGCCCG
AGCCGCAGCG CGTTCCTGTC GTCGTTCTTC ACGCTCGTGG GTACCCACGG TCTGCACGTT
GCCAGCGGCA TGCTGTGGAT GCTCGTGCTG ATGTGGCAAC TGTCGAAGAA GGGCCTGACC
CCGGTCGTGG CCAAGCGCCT GAACTGCCTC AGCCTGTTCT GGCACTTCCT GGACGTGGTC
TGGATCGGTG TGTTCACCGT GGTCTACCTG ATGGGAGCAA TGTAA
 
Protein sequence
MSTEVLDRFG AKAPAHAHSH DEAHDHAHHD TSENTVFGFW LYLMSDCILF ACLFAAFAVL 
RGEVAGGPSG KEIFELNYVL VETAILLFSS ITYGFAMVSM QNHQKGRVMF WLGVTFLLGA
AFMGMEINEF AHLIHEGAGP SRSAFLSSFF TLVGTHGLHV ASGMLWMLVL MWQLSKKGLT
PVVAKRLNCL SLFWHFLDVV WIGVFTVVYL MGAM