Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0930 |
Symbol | |
ID | 4037727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1014006 |
End bp | 1015259 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637976311 |
Product | NADH dehydrogenase subunit D |
Protein accession | YP_583085 |
Protein GI | 94309875 |
COG category | [C] Energy production and conversion |
COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.156514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGATA TCAAGAACTA CACCCTCAAC TTCGGCCCCC AACACCCTGC AGCGCACGGC GTGCTGCGTC TGGTGCTTGA ACTGGACGGC GAAGTCATCC AGCGCGCCGA CCCCCATATC GGCCTGCTGC ATCGAGCCAC CGAAAAGCTG GCCGAGCAGA AGACCTGGAT TCAAAGCGTC CCCTACATGG ATCGTCTCGA CTACGTGTCG ATGATGGTCA ACGAACACGC GTACGTGATG GCGATCGAGC GCTTGCTGGG CCTCGAGGTG CCGATTCGCG CCCAGTACAT CCGCGTAATG TTCGACGAAA TCACCCGTCT GCTGAACCAC CTGATGTGGA TCGGCTCGCA CGCGCTGGAC GTGGGTGCGA TGGCGGTGTT CCTCTACGCG TTCCGCGAGC GTGAGGACAT GTTCGACATG TACGAGGCGG TGTCGGGCGC GCGTATGCAC GCGGCCTACT ACCGTCCGGG CGGCGTCTAC CGCGACCTGC CTGACACGAT GCCGCAATAT CGTGCGTCGA AAGTCCACAA CGAGAAGGCC ATCAAGGTCA TGAACGAAGC CCGTTCGGGC TCGCTGCTGG ACTTCATCGA GGACTTCACG AACCGTTTCC CGACCTATGT CGATGAATAC GAGACGCTGC TGACCGATAA CCGTATCTGG AAGCAACGTC TGGTCGATAT CGGTGTGGTC ACGCCGGAGC GTGCGCTGCA GATGGGTTTC ACCGGTCCGA TGCTGCGTGG CTCGGGTATC GAGTGGGATC TGCGCAAGAA GCAGCCGTAC GAGGTCTACG ACAAGATGGA CTTCGATATC CCCGTGGGTA CGGCGGGCGA CTGCTATTCG CGTTACCTGG TGCGTGTTGA AGAAATGCGC CAGTCGAACC GCATCATCAA GCAGTGCATT GACTGGCTGC GTCGCAACCC GGGTCCGGTG ATTACCGAGA ACCACAAGGT GGCGCCGCCG TCGCGTGTGG ACATGAAGTC GAACATGGAA GAGCTGATTC ACCACTTCAA GCTCTTCACC GAAGGTATCC ACGTGCCGGC AGGCGAGGCC TACGCAGCGG TGGAGCACCC GAAGGGCGAG TTCGGCATCT ATGCGATTTC GGATGGCGCG AACAAGCCGT ACCGTCTGAA GATCCGTGCC CCGGGCTTTG TCCACCTGGC CGCGCTCGAC GAAATGGCCA GGGGACACAT GATTGCGGAT GCGGTCACGA TCATCGGTAC ACAGGACATC GTGTTCGGCG AGATCGACCG CTAA
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Protein sequence | MADIKNYTLN FGPQHPAAHG VLRLVLELDG EVIQRADPHI GLLHRATEKL AEQKTWIQSV PYMDRLDYVS MMVNEHAYVM AIERLLGLEV PIRAQYIRVM FDEITRLLNH LMWIGSHALD VGAMAVFLYA FREREDMFDM YEAVSGARMH AAYYRPGGVY RDLPDTMPQY RASKVHNEKA IKVMNEARSG SLLDFIEDFT NRFPTYVDEY ETLLTDNRIW KQRLVDIGVV TPERALQMGF TGPMLRGSGI EWDLRKKQPY EVYDKMDFDI PVGTAGDCYS RYLVRVEEMR QSNRIIKQCI DWLRRNPGPV ITENHKVAPP SRVDMKSNME ELIHHFKLFT EGIHVPAGEA YAAVEHPKGE FGIYAISDGA NKPYRLKIRA PGFVHLAALD EMARGHMIAD AVTIIGTQDI VFGEIDR
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