Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0867 |
Symbol | |
ID | 4037661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 945964 |
End bp | 947442 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637976246 |
Product | diguanylate cyclase |
Protein accession | YP_583022 |
Protein GI | 94309812 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGCAAG GACCCGCCGC TTCGCGGCTC GACGATGACT ATCGAACGCT GTTCCAGCTA GCGCCCGTTT CGCTGTGGCT GGAGGATTTT AGCGCGGTGC GGCAGGCCTT CACGCAGTTG CGGGCCGATG GCGTCACCAA TCTGCGCCGC CACCTGCGCG ACAACCCCTC GGAAGTGGCA CGGTGCTCTT CTCTAATTCG CGTGCTCGAC GTCAACCGCC GGACGCTGGA CCTCTTCCGC GCCGTCGATC TGGATACGCT GGTTGCCAAC CTCCACACCG TGTTTCGCGA CGACATGTTC GATCAACACG TCGAGGAACT CGGACAACTG TGGGACGGCG ACAATCGTTT CTCGAGCCAG ACCGTCAACT ACACGCTCGA CGGCGAACGG CTCGACATCC GTCTGGAGGC CCGCGTCATG CCTGGGCACG AGGACGACTG GTCGCGTGTG CTGCTGTCGA TCGAGGACAT CACGGCCCGC GTGCGCAATG AACGTGACCT GCGCCGGGCC CAGCAGTACG CCGTGGGCCT GTTCGAGCAT TCGCCGGTAT CGCTCTGGGT GGAAGATTTC AGCGTGGTCA AGATGCTGCT CGACGAAGTC CGCGCGGCAG GGATCACGGA TTTCCGCACG TTCCTGAACG TGCACCCCGA TTTCGTCTCG CGCTGCATGC AGGAGATCCG CGTGCTCGAC GTCAACCAGC AGACGCTGGC GATGTTCGGC GCACCCAGCA AGGAAATCCT GCTTTCGCGA CTCGGCGACG TGTTTCGCGA CGACATGCGC ATCCACTTTG CCGAGCAACT GGTCGACCTC TGGCATGAAA AGCTGTGGCA GCAACGCGAA GTCATCAACT ACGCGCTGGA CGGCCGCCCG GTGGACGTGT TCATGCAGTG GTCGGTATTT CCGGGGCGAG AGGCTGACTG GGACCAGGTG CTGGTGTCGC TGACCGACAT CACGGCACGC AAGAAGGCCG AAGCCTACGT CGAGTTCCTC GGCAAGCACG ATGTGCTTAC CAAACTCTAC AACCGCGCGT ACTACGAGGA TGAACTGGCG CGGCTGGGCC GCAAGGGGCC GTGGCCGGTC AGCGTGATCG CGGTGGACCT GAATGGACTG AAGGCCGTGA ACGATCAGTT CGGCCACGGG GACGGCGATG GCCTGCTACG CCGCACTGGC GAAGTGCTGA AGAAAGCCGT GGGCGAACAG GCATGCATTG CGCGCACCGG TGGCGACGAG TTCATGGTGC TGCTTCCCGG ACGCGACGAA CGGGGTGCAG CGACGGTGGT GGAGCAGATC GAAGAGGTGG TCGTCCTCAA CAACCAGTTC TATCCCGGGG CGCGGCTTTC ATTCTCGATC GGGTCGGCCA CCTGCATGCA GGGAGACCGC CTGACCGATG CCGTGAAAAC TGCGGACAGA CGGATGTACG ACGCCAAGCG CGCCTACTAC GAGGCGCTGG GCAACGAACG CGCGACGCAG AACGACTGA
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Protein sequence | MAQGPAASRL DDDYRTLFQL APVSLWLEDF SAVRQAFTQL RADGVTNLRR HLRDNPSEVA RCSSLIRVLD VNRRTLDLFR AVDLDTLVAN LHTVFRDDMF DQHVEELGQL WDGDNRFSSQ TVNYTLDGER LDIRLEARVM PGHEDDWSRV LLSIEDITAR VRNERDLRRA QQYAVGLFEH SPVSLWVEDF SVVKMLLDEV RAAGITDFRT FLNVHPDFVS RCMQEIRVLD VNQQTLAMFG APSKEILLSR LGDVFRDDMR IHFAEQLVDL WHEKLWQQRE VINYALDGRP VDVFMQWSVF PGREADWDQV LVSLTDITAR KKAEAYVEFL GKHDVLTKLY NRAYYEDELA RLGRKGPWPV SVIAVDLNGL KAVNDQFGHG DGDGLLRRTG EVLKKAVGEQ ACIARTGGDE FMVLLPGRDE RGAATVVEQI EEVVVLNNQF YPGARLSFSI GSATCMQGDR LTDAVKTADR RMYDAKRAYY EALGNERATQ ND
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