| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0858 |
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| Symbol | |
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| ID | 4037650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 937675 |
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| End bp | 940299 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637976235 |
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| Product | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA |
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| Protein accession | YP_583013 |
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| Protein GI | 94309803 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.908365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTCC CGCCGCCCGA TCCTGCCGTT GCTCCGCCCG CCGAACCGGC GTCGCGGGCT
CCGCATGGCC GGCCGGCGAC CAGCGGGCAG TCCGCCTCCG CCACGACAGT GGGTTCCGGA
GCGCCGCTGC CGGCTTCCTC CGCACTGGCG TCCACACCAT CGCAAGCCGG ACCGACCGGA
CGTAAGCGTC CAGGACAATC CACTGTGACT GCCCGTACCG GTGCTCCCAA TCTTCCCGAT
CCGCTCGGCG ACAACGTCGT CGGCGAGCGT GCCGTCGTAC CGCCGATCCA GCAGGGCAAG
TCACGCACCG CGTTGACCAA CGAGCTCAAT GCCGAGCCCG TGGCTGGCAC GGTGCCCGCG
GCTCCCGGTG GCGATCTGTT CATCGACGCC GTGCTGGCGC AGTCTTATCG GCACTTTTTC
GGGCCGACCT CGCAGCCGGC GGTGCCGCCG CGCCAACAGG TCATCTCGAT CACGCGGCTG
ATGGAGAAGC TCGCTTACCT GAAGCCTGCC GATCAGGCCC TGGTGCGCGA GGCATTCCAG
TTTTCCGACG AGGCCCACCT GGGCCAGTAC CGGCAAAGTG GGGAACCGTA CATCACGCAC
CCGGTGGCGG TGGCCGAGCT TTGTGCCGAC TGGAAGCTCG ATGTGCAATC CATCATGGCG
GCGCTGCTGC ACGACGTGAT GGAGGACCAG GGCATCACGA AGAGCGAACT GGCCGAGAAA
TTCGGTCCGA AGGTCTCCGA ACTCGTAGAT GGTCTGACCA AGCTGGACAA GCTCGAATTC
CAGAGCCGGG AGCAGGCACA GGCGGAGAGC TTCCGCAAGA TGCTGCTGGC GATGGCGCGT
GACGTGCGGG TGATTCTGGT CAAGCTGGCC GATCGCACGC ACAACATGCG CACGCTCGAT
TTCGTGCCGC CCGAGAAGCG GCGACGGATC GCGCTGGAGA CCATGGAGAT CTACGCGCCG
ATCGCGCATC GGTTGGGTCT CAATACGATT TATCGCGAGC TGCAGGAACT GTCGTTCAAG
GTCGGCTCGC CATTCCGCTA CGCCACGCTC GAGAAAGCCG TGAAGGCCGC GCGCGGCAAC
CGGCGCGAAG TGGTCAAGCG GATTCTGGAA GCCGCCCAGT CCGCGCTGGC CGGGGCCGGC
ATCGTGGCGG AATTGTCGGG CCGCGAGAAG ACGCTCTACA GCATCTACCG CAAGATGCAC
GACAAGCAGT TGTCGTTCTC GCAGGTACTC GATGTCTATG GTTTCCGCGT GGTCGTGGAA
ACGCAGATGC ACTGCTACAT GGCGATGGGC GCGCTGCACG GCCTTTACAA GCCGATGCCG
GGCAAGTTCA AGGATTACAT CGCCATTCCG AAGATCAACG GCTACCAGTC GCTGCACACG
ACTTTGGTTG GCCCGTTCGG CACGCCGGTG GAGTTCCAGA TCCGCACCCG TGGGATGCAC
CAGATCGCCG AGGCCGGCGT GGCTGCGCAC TGGATGTACA AGCACCAGGC AGACCATGCC
AACGATATCC AGCAGCAGGC GCACCAGTGG CTGCAGTCGC TGCTCGATAT CCAGAGCCAG
ACCGGCGATT CGCAGGAATT CCTCGAACAC GTCAAGATCG ATCTGTTCCC GGACGCCGTG
TACGTGTTCA CGCCGAAGGG GCATATTCGG GCGCTGCCCC GCGGCGCGAC GGCACTCGAT
TTTGCCTACG CGGTCCACAG CGACCTGGGC AACCAGTGTG TGGCGGTCAA GATCAACAAC
GAGCTTCTGC CGTTGCGCAC GGAGCTCAAG AGTGGCGACA TCGTCGAGGT CGTGACGGCG
CCGTACTCGA AGCCGAATCC GTCATGGCTG GCGTTCGTGC GCACGGGCAA GGCGCGCGCG
GCGATTCGCC ACTACCTGAA GACCACCAAG CTCGACGAGG CGATCCAGCT CGGCGAGCGC
CTGCTGGAAC AATCAACGCG CCAGCTCGGC ATCGAGCTCA AGGCGGTGCC ACAGTCGGTC
TGGGATCGCA TGATCCAGTG GACAGGCAAC AAGCTCAAGG AAGACATCTT CGCCGACCTC
GCGCTGGGAC GCCGTGTGCC CGCAGTGGTC GCGCGCCGGA TGGAAATCCT GCTGCAGGAA
CTGTCGGGAG ATGTCGATAG CGCGTTGCTG GCGGCCGTCC AGACGTTCGC GGGGGAAGAT
GCGCCGGCCG TGCCGATTAC CGGCGACGAA GGCATGTCGA TGATCTTCTC GGCTTGCTGC
CGTCCGATCC CCGGCGATTC GATCGTCGGC TACCTCGGCA AGGGCGAAGG GCTGCAGATC
CACGTGCAGG ATTGCAAGGT GGCCAAGCGG CTGCACAGCA AGGACCCGGA GCACTGGATC
GAGGTGATGT GGGCCAAGAA GACGACGCGC GCGTTCGACG TTTCGATCAA GATCATGGTC
CGCAACGTCA AGGGTATCGT GGCCCGCGTC GCTGCGGACC TGACCTCCGC GGATGCCAAC
GTCGCGCACG TGGCGATGGA ACCGCAGCAG GGCGGCCATC AGGAGGCTAC CTACATGCAG
TTCGTGATCC AGGTACAGAA CCGCCTGCAC CTGGCCAACG TCATGCGGGC GCTGCGCCGC
AACCCTGATG TGATCCGAAT CTTCCGCGAC CGCAACGACG GCTAA
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| Protein sequence | MTFPPPDPAV APPAEPASRA PHGRPATSGQ SASATTVGSG APLPASSALA STPSQAGPTG
RKRPGQSTVT ARTGAPNLPD PLGDNVVGER AVVPPIQQGK SRTALTNELN AEPVAGTVPA
APGGDLFIDA VLAQSYRHFF GPTSQPAVPP RQQVISITRL MEKLAYLKPA DQALVREAFQ
FSDEAHLGQY RQSGEPYITH PVAVAELCAD WKLDVQSIMA ALLHDVMEDQ GITKSELAEK
FGPKVSELVD GLTKLDKLEF QSREQAQAES FRKMLLAMAR DVRVILVKLA DRTHNMRTLD
FVPPEKRRRI ALETMEIYAP IAHRLGLNTI YRELQELSFK VGSPFRYATL EKAVKAARGN
RREVVKRILE AAQSALAGAG IVAELSGREK TLYSIYRKMH DKQLSFSQVL DVYGFRVVVE
TQMHCYMAMG ALHGLYKPMP GKFKDYIAIP KINGYQSLHT TLVGPFGTPV EFQIRTRGMH
QIAEAGVAAH WMYKHQADHA NDIQQQAHQW LQSLLDIQSQ TGDSQEFLEH VKIDLFPDAV
YVFTPKGHIR ALPRGATALD FAYAVHSDLG NQCVAVKINN ELLPLRTELK SGDIVEVVTA
PYSKPNPSWL AFVRTGKARA AIRHYLKTTK LDEAIQLGER LLEQSTRQLG IELKAVPQSV
WDRMIQWTGN KLKEDIFADL ALGRRVPAVV ARRMEILLQE LSGDVDSALL AAVQTFAGED
APAVPITGDE GMSMIFSACC RPIPGDSIVG YLGKGEGLQI HVQDCKVAKR LHSKDPEHWI
EVMWAKKTTR AFDVSIKIMV RNVKGIVARV AADLTSADAN VAHVAMEPQQ GGHQEATYMQ
FVIQVQNRLH LANVMRALRR NPDVIRIFRD RNDG
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