Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0830 |
Symbol | |
ID | 4037621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 904524 |
End bp | 905744 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637976206 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_582985 |
Protein GI | 94309775 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0441069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0516739 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGCTT TAAGCCATCT TCGCGTCCTC GACCTGACCC GCGTGCTCGC GGGCCCGTGG TGCGCCCAGA ATCTTGCCGA TTTCGGCGCC GACGTGATCA AGATCGAGCG CCCAGGCGCC GGTGACGACA CGCGCATCTG GGGCCCGCCC TGGCTCAAGA CCCCCGAGGG TGAAGACACG GCCGAGGCCG CCTACTACCT GGCGGCCAAC CGCAACAAGC GTTCGGTGAC GTGCGACATC AGCACGCCGG AGGGGCAGCA ACTCGTGCGC GACCTGGCCG CGCAGAGCGA TGTGGTGCTC GAAAACTACA AGGTCGGACA ACTCAAGAAG TATGGCCTCG ATTATGAATC GCTCAAAGCG ATCAAGCCGG ACCTGATCTA CTGCTCGGTC ACCGGCTTCG GACAGACCGG CCCCTACGCC CAGCGTCCGG GCTACGATTT CATCATCCAG GGCATGGGTG GCTTCATGAG CATCACGGGC GAGCGCGACG ACCTGCCCGG AGGCGGCCCG CAGAAAGCCG GCGTGGCGAT CTCCGACCTC ATGACGGGCC AGTACGCCAC CATCGCCGTG CTGGCCGCAC TGGCCCACCG CGACCGTACC GGCGAAGGCC AGTACATCGA CATGGCGCTG CTGGACGTGC AGGTGTCGAT GCTGGCGAAC ATGAACACCA ACTACCTGGC CAGCGGCGTC CCGCCGAAGC GCTGGGGCAA CGCGCACCCG AACATCGTCC CTTACCAGAC GTTCCAGGCC GCCGATGGAT GGCTCATCGT CGCGGTGGGC AACGACGGCC AGTTCCGCAA GTTCGTCACC GCCGGCGGCC GCCCCGAGTT GGCCGACGAC CCGCGCTTCG CCACCAATCC GCAGCGCGTG GCGCACCGAG ACGTGCTGGT ACCGATCCTG GCCGAGATGG TGGCGCCGCG CACGCGTGAA CAGTGGATTC TGGACCTCGA GCGTGCCAGC GTGCCATGCG GGCCGATCAA CACGCTCGAC GAGGTCTTCG AGAACGAGCA GGTGGTGGCG CGTGGCCTGC GCGTGGACCT GCCCCACCCC TCGGCCGGCA CGGTCAAGCT GGTGGGCAGC CCGATGAAGA TGAGCGCCAC GCCGACCGAG GCGCTGCGCC ATCCGCCGTT GCTTGGGGAG CACACGGATG TGGTGCTTGG CGAGACACTC GGCTACAGTG CCGAACACAT CGCCGCCCTG CGCAACAAGG GCGTGGTCTG A
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Protein sequence | MGALSHLRVL DLTRVLAGPW CAQNLADFGA DVIKIERPGA GDDTRIWGPP WLKTPEGEDT AEAAYYLAAN RNKRSVTCDI STPEGQQLVR DLAAQSDVVL ENYKVGQLKK YGLDYESLKA IKPDLIYCSV TGFGQTGPYA QRPGYDFIIQ GMGGFMSITG ERDDLPGGGP QKAGVAISDL MTGQYATIAV LAALAHRDRT GEGQYIDMAL LDVQVSMLAN MNTNYLASGV PPKRWGNAHP NIVPYQTFQA ADGWLIVAVG NDGQFRKFVT AGGRPELADD PRFATNPQRV AHRDVLVPIL AEMVAPRTRE QWILDLERAS VPCGPINTLD EVFENEQVVA RGLRVDLPHP SAGTVKLVGS PMKMSATPTE ALRHPPLLGE HTDVVLGETL GYSAEHIAAL RNKGVV
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