| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0819 |
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| Symbol | |
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| ID | 4037610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 891615 |
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| End bp | 893066 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637976195 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_582974 |
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| Protein GI | 94309764 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.108175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCCG CTTCCTTCGC CACCGTTCCC CCCCAAACTG CCCCCGATGC CTTGGCCGCG
CTCTGGCGCG AGGCCGGGAT GCCCCCGGAA GCACTTGGGC ATCTGACGCT GACCGGCGCC
GATCCGGTTC TCCCATCCAG CTTCGCCATT GGCACTGCGG CCCAGACCAG CCTGGGCGCG
TCGGCGCTGG CTGCCGCCGC GTTGTGGGCG CAGCGGACCG GCAACTGGCA GGGCGTCGCG
GTCGATATGC GCCATGCCAT GGCCGAGTTT CGCAGCGAGC GCTATCTGCG CGTCAAAGGT
GGCGCCGCGC CCGAGCTATG GGACAAGATC GCGGGGCTGT ACCCGTGCGG CGATGGCCGC
TGGGTCAGGC TGCATACGAA TTTTCCGCAT CATCGGGATG GCGTGCTGAA GCTTCTGCAT
TGCGCGCACG ACAAGGATGC CGTGCGCGCT GCGCTGTCCA AGTGGAAGGC CGAGGACTTC
GAAGCGGCGG CCTCGGACGC CGGCATGGTC GTGGCGGCGA TGCGGACCTA TGACGAATGG
CAGGCGCACC CGCAGGCTCA GGCGTTGCGG GGGCTCCCGC CGGTCATCAT CGAACGGATC
GGCGATGCGC CGCCGATGCC GTTGCCGGCA TTTGCACCCC AGGCCGAAAT CAATGTCGAT
GCCAGGCCGT TGTCCGGCGT GCGCGTGCTC GACTTCACGC GCATCATCGC CGGCCCGGTG
GCGGGGCGGA CATTGGCCGC CCACGGCGCC GATGTGTTGC TGGTCACGGC TGCACACCTG
CCGTCGATTC CGCCGCTCGT TATCGATACC GGGCGTGGCA AACGCTCCTG CCAGCTCGAT
CTGCGTGACG CGGATGACAA GCGCGCGCTG CACAAGCTGC TGCACGGCGC CGATGTCGTG
GTGCAGGGGT ATCGCCCGAA CGGGCTGGCG GAGCTCGGGG TCGGTGCCGA AGCCGCGGCG
CGCGCGCGTC CGGGCATCGT CTATGTGTCG CTATCTGCTT ATGGCCATGT CGGGCCGTGG
GCGGGCAAGC GTGGTTTCGA TTCGCTCGTG CAGACGGCCA CCGGCTTCAA TGACGACGAA
GCCCGTGCAG CGGGCTCCAC CGAGCCGAAG CCGCTCCCGG CACAGGTGCT GGATCATGCC
GCGGGGTATC TGCTGGCCTT CGGCGCGATG GCGGCGCTGC ACCGCCGTGC GGTGGAAGGC
GGAAGCTGGC ATGTGCGCGT GTCGCTGGCC CAGGTCGGGC AATGGTTGCG CGGGCTAGGT
CGCCTGCCGG ATGGCTTCAG CGTGCCCGAC CAGCACATCG ACGAGATTTC GGACCTGCTC
GAAGTGCAGG AGTCGGGCTT CGGCGAGTTG ACCGTGGTGC GTCACGCGGC CCAGTTATCG
GCAACGCCGG CATATTGGGC GTTGCCTTCC GAACCACTCG GTACCCACGC GGCCGAGTGG
CTGCCGCGCT AG
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| Protein sequence | MNSASFATVP PQTAPDALAA LWREAGMPPE ALGHLTLTGA DPVLPSSFAI GTAAQTSLGA
SALAAAALWA QRTGNWQGVA VDMRHAMAEF RSERYLRVKG GAAPELWDKI AGLYPCGDGR
WVRLHTNFPH HRDGVLKLLH CAHDKDAVRA ALSKWKAEDF EAAASDAGMV VAAMRTYDEW
QAHPQAQALR GLPPVIIERI GDAPPMPLPA FAPQAEINVD ARPLSGVRVL DFTRIIAGPV
AGRTLAAHGA DVLLVTAAHL PSIPPLVIDT GRGKRSCQLD LRDADDKRAL HKLLHGADVV
VQGYRPNGLA ELGVGAEAAA RARPGIVYVS LSAYGHVGPW AGKRGFDSLV QTATGFNDDE
ARAAGSTEPK PLPAQVLDHA AGYLLAFGAM AALHRRAVEG GSWHVRVSLA QVGQWLRGLG
RLPDGFSVPD QHIDEISDLL EVQESGFGEL TVVRHAAQLS ATPAYWALPS EPLGTHAAEW
LPR
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