Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0795 |
Symbol | |
ID | 4037586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 870133 |
End bp | 871053 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637976171 |
Product | inner-membrane translocator |
Protein accession | YP_582950 |
Protein GI | 94309740 |
COG category | [R] General function prediction only |
COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0537917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.261256 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAAC TCGCTCCCCT GATCGCCACA GCGATCAACG CCGGCACTCC GCTGCTGCTG GCCGCGCTCG GTCTGCTCAT CAACGAACGC GCCGGCGTGC TCAACCTTGG TGCCGAAGGC ATGATGCTGG TGGCCGCCGC ATTCGGCTTC ATGGTCGGCT ACCAGACCCA GTCGCCGATG CTCGGCTTTG TCGCGGGCGC CGTGGCCGGC ATGCTGATGG CCACGCTGTT CTCGTGGCTC GCGCTGGTAC TGGCCACCAA TCAGGTGGCC ACCGGCCTGG CGTTGTCGAT CTTCGGCACG GGCCTGTCGG CATTCATCGC CCAGCGCTTT GTCGGTTACG CCATGCCCGC GCAGGCCAAG TCGGTCCCAT ATCTGTCCGA TCTGCCATTC GTCGGCCCGG CGTTCTTCCA GCACCACTGG ATGGTCTATT TCAGCCTGGC CCTGTGTTTC GCCATCATGT GGTTCCTGTT CCGCACACGC GCTGGCCTGA CACTGCGCGC GATCGGCGAA TCGCCCGAAT CGGCGCACGC GCTCGGCTAT CCGGTGCGCT GGATCCGCTT CTGCGCGCTG CTGTTCGGCG GTGCGTGCTG CGGCCTTGCC GGCGCGTACC TGTCGCTGGT CTACACGCCG ATGTGGGTGG AAAACCTCGT GGCCGGCCGT GGCTGGATCG CACTTGCACT GACCACGTTC GCAACCTGGC GTCCGGGCCG CGTGCTGATC GGCGCATGGC TGTTCGGCGG CGTGACGATC CTGCAGTTCT ACCTGCAGGG TATCGGCGTA TCGGTGCCGT CGCAGTTCCT GTCGATGCTG CCGTACGCGG CGACGATCGT CGTGCTGGCA TTGATTTCGC GTAATCCGGC CTGGATCCGC CTGAACATGC CGGCCTCGCT CGGCAAGCCG TTCCGCCCCG GCAACGCGTG A
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Protein sequence | MEQLAPLIAT AINAGTPLLL AALGLLINER AGVLNLGAEG MMLVAAAFGF MVGYQTQSPM LGFVAGAVAG MLMATLFSWL ALVLATNQVA TGLALSIFGT GLSAFIAQRF VGYAMPAQAK SVPYLSDLPF VGPAFFQHHW MVYFSLALCF AIMWFLFRTR AGLTLRAIGE SPESAHALGY PVRWIRFCAL LFGGACCGLA GAYLSLVYTP MWVENLVAGR GWIALALTTF ATWRPGRVLI GAWLFGGVTI LQFYLQGIGV SVPSQFLSML PYAATIVVLA LISRNPAWIR LNMPASLGKP FRPGNA
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