| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0722 |
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| Symbol | rpsA |
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| ID | 4037513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 799106 |
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| End bp | 800800 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637976098 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_582877 |
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| Protein GI | 94309667 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.151231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACC TGCAAACTAA CGAATCCTTT GCCGCACTGT TCGAGGAATC GATCGCCCGC
TCCAATATGA AGGCTGGCGA AGTGATTTCC GCTGAAGTCG TGCGCATCGA CCACAACTTC
GTGGTCGTCA ACGCCGGCCT CAAGTCCGAG GCATTTGTGC CGGTGGAGGA GTTCCTGAAC
GACCAGGGCG AACTCGAAGT GCAGGCCGGC GACTACGTGT CCGTGGCCAT CGACGCGCTC
GAGAACGGCT ATGGCGACAC CATCCTTTCC CGCGACAAGG CCAAGCGCCT GGCATCGTGG
CTGAACCTCG AGAAGGCGCT GGAAGACGGC GAGATCATCT CGGGTACCGT GACCGGCAAG
GTCAAGGGCG GCCTGACCGT CATGGTCAAT GGCATCCGTG CCTTCCTGCC GGGTTCGCTC
GTCGACGTGC GTCCGATCAA GGACACCACG CCGTACGAAG GCAAGACCCT GGAATTCAAG
GTCATCAAGC TCGACCGCAA GCGTAACAAC GTCGTGCTGT CGCGCCGCGC CGTGGTGGAA
GCCACGCTGG GCGAAGAGCG TCAGAAGCTG ATGGAAACGC TGAAGGAAGG CGCGATCGTC
AACGGTATCG TCAAGAACAT CACCGACTAC GGCGCGTTCG TGGACCTCGG CGGTATCGAC
GGCCTGCTGC ACATCACCGA CCTGGCATGG CGTCGTGTGC GTCACCCGAG CGAAGTGCTG
TCGGTTGGCC AGGAAATCAC CGCCAAGATC CTCAAGTTCG ACCAGGAAAA GAACCGCGTC
TCGCTGGGCG TGAAGCAACT GGGCGAAGAT CCGTGGGTGG GCATCTCGCG CCGCTACCCG
CAAGGTACCC GCCTGTTCGG CAAGGTGACC AACCTGACCG ACTACGGCGC GTTCGTCGAG
ATCGAAGCCG GTATCGAAGG TCTGGTGCAC GTGTCCGAAA TGGACTGGAC CAACAAGAAC
GTGGCTCCGT CGAAGGTTGT CCAACTGGGC GACGAAGTGG AAGTCATGGT TCTGGATATC
GACGAAGACA AGCGTCGTAT CAGCCTGGGC ATGAAGCAGT GCAAGGCCAA TCCGTGGGAC
GATTTCAGCC GCAACCACAA GAAGGGCGAC AAGCTGACGG GCCAGATCAA GTCGATCACC
GACTTCGGCG TGTTCATCGG TCTGCCTGGT GGTATCGACG GCCTGGTGCA CCTGTCCGAC
CTGTCGTGGC AAGAGTCGGG CGAAGAAGCC GTGCGCAAGT ACAAGAAGGG CGACGAAGTG
GAAGCTGTCG TTCTGGGCAT CGACGTCGAC AAGGAACGCA TCTCGCTGGG CATCAAGCAA
CTGTCGGGCG ATCCGTTCAA CAACTTCATC TCGGCCAACG ACAAGGGCTC GCTCGTGAAT
GGCACGATCA AGGCCGTTGA CGCCAAGGGC GCCGTGGTGC AGCTGGCTGA CGACGTGGAA
GGCTACCTGC GCGCTTCGGA AATCTCCGCC GATCGCGTGG AAGACGCCCG CAACGTGCTG
AAGGAAGGCG AGCAGATCAC CGCCCTGGTG GTGAACGTCG ACCGCAAGTC GCGCAACATC
AACCTGTCGA TCAAGGCCAA GGATTCCGCA GAGCAGCAAG AAGCGATGCA GAAGTTCCAG
GCTGACACCG GCACGGCTGG CACGACCAAC CTCGGCGCAC TGCTGAAGGC CAAGCTCGGC
CAGGACAACC AGTAA
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| Protein sequence | MSDLQTNESF AALFEESIAR SNMKAGEVIS AEVVRIDHNF VVVNAGLKSE AFVPVEEFLN
DQGELEVQAG DYVSVAIDAL ENGYGDTILS RDKAKRLASW LNLEKALEDG EIISGTVTGK
VKGGLTVMVN GIRAFLPGSL VDVRPIKDTT PYEGKTLEFK VIKLDRKRNN VVLSRRAVVE
ATLGEERQKL METLKEGAIV NGIVKNITDY GAFVDLGGID GLLHITDLAW RRVRHPSEVL
SVGQEITAKI LKFDQEKNRV SLGVKQLGED PWVGISRRYP QGTRLFGKVT NLTDYGAFVE
IEAGIEGLVH VSEMDWTNKN VAPSKVVQLG DEVEVMVLDI DEDKRRISLG MKQCKANPWD
DFSRNHKKGD KLTGQIKSIT DFGVFIGLPG GIDGLVHLSD LSWQESGEEA VRKYKKGDEV
EAVVLGIDVD KERISLGIKQ LSGDPFNNFI SANDKGSLVN GTIKAVDAKG AVVQLADDVE
GYLRASEISA DRVEDARNVL KEGEQITALV VNVDRKSRNI NLSIKAKDSA EQQEAMQKFQ
ADTGTAGTTN LGALLKAKLG QDNQ
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