| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0641 |
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| Symbol | |
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| ID | 4037430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 707667 |
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| End bp | 709037 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637976016 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_582796 |
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| Protein GI | 94309586 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.677023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.303221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAATCC GCGAACAGCT CGCCAGCGCC GGGACACCCC ACACGGCAAA TGGTCACGCC
GCGATCCATT TCTCGATGGC CACCAACACG ACATCGCCCG GGTACCACGC GCTGAAGCGC
GACGTGCACG AGACCGTGCT GGACCGCGTG GAGCTGGAGC GCCTGGCGCA CTTCCCGCAG
GAACAGGTAC GTCAGGAGAT CGCCTCGCTG GTGAGCCTGA TCATCGAGGA ACATAAGGTG
CTGCTCAATG ACAACGAGCG GCGACAACTC ACCGTAGAGA TCTATGACGA GATGTTCGGC
TTCGGGCCGC TGGAACCACT GTTGAAGGAC CCCACGGTCT CGGACATCCT GGTCAACACG
GCACGACAAA CCTACGTGGA GCGGCGCGGC AAGCTCGAAC TGACGAATGT GGTGTTCTAT
GACGACGCCC ATTTGATGAA AGTCATCGAG AAGATCGTGT CGCGCGTCGG CCGCCGCATC
GACGAAACCA GCCCCATGGT GGATGCGCGC CTGCCGGACG GCTCTCGCGT TAACGCCATC
ATCCCGCCAT CTGCCATCGA TGGTCCACTG CTGTCGATTC GTCGCTTCTC CGTGAACCCG
CTGCAGGTGT CCGACCTGGT CGAGCTGAAG AGCCTCACGC AGCCGATGGC GCAAATGCTG
CAGGCGCTGG CGCATGCCAA GATCAACGTG TTGGTCTCGG GCGGTACGGG CAGCGGGAAG
ACCACGCTGC TGAACATCCT GTCCGGATTC ATCCCGGAAG ACGAACGCGT GGTGACCATC
GAGGATGCCG CCGAACTCCA ACTGCGCCAG CCTCATGTCC TGCGCCTGGA AACGCGGCCG
CCCAATATCG AAGGCAAGGG AGAAATCACC CAGCGCGCGC TGGTGCGCAA CGCGCTGCGG
ATGCGCCCGG ACCGCATCAT CCTCGGCGAA ATCCGTGGTG GCGAGGCACT GGACATGCTC
AACGCCATGA ACACCGGCCA CGAGGGCTCG CTCACGACGA TCCACGCCAA CACCCCGCGT
GATGCGCTGA CGCGGCTCGA GAACATGGTC AGCATGGCAG GCCTGACCAT GCCGGCCAAG
GCCATGCGCC AGCAGATCGC CTCGGCGATC ACGGTGATCG TGCAGGCGGC GCGTCTGACC
GACGGGCGGC GCAAGATCAT CAGCATCCAG GAAATCACTG GCATGGAAGG CGACATCATC
AACACGCAGG AGATCTTCAC GTTCCAGCGC ACGGGTGTGG CCGAGGATGG CACGGTCCGC
GGCCACTTCA AGGCCACGGG CGTGTATCCG AAGTTTGCGG AGCGGCTGCG CGTCTTTGGC
GTCGGGCTGC CGGACGAGAC CTACGATCCC GCGCGGCGCT ACGAAGTCTG A
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| Protein sequence | MSIREQLASA GTPHTANGHA AIHFSMATNT TSPGYHALKR DVHETVLDRV ELERLAHFPQ
EQVRQEIASL VSLIIEEHKV LLNDNERRQL TVEIYDEMFG FGPLEPLLKD PTVSDILVNT
ARQTYVERRG KLELTNVVFY DDAHLMKVIE KIVSRVGRRI DETSPMVDAR LPDGSRVNAI
IPPSAIDGPL LSIRRFSVNP LQVSDLVELK SLTQPMAQML QALAHAKINV LVSGGTGSGK
TTLLNILSGF IPEDERVVTI EDAAELQLRQ PHVLRLETRP PNIEGKGEIT QRALVRNALR
MRPDRIILGE IRGGEALDML NAMNTGHEGS LTTIHANTPR DALTRLENMV SMAGLTMPAK
AMRQQIASAI TVIVQAARLT DGRRKIISIQ EITGMEGDII NTQEIFTFQR TGVAEDGTVR
GHFKATGVYP KFAERLRVFG VGLPDETYDP ARRYEV
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