Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0639 |
Symbol | |
ID | 4037428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 705624 |
End bp | 706595 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637976014 |
Product | type II secretion system protein |
Protein accession | YP_582794 |
Protein GI | 94309584 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2064] Flp pilus assembly protein TadC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.297778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGACA TCATGCAGGG GTTTCGGGCA GACCAGTTGA TTGTGCTGGC GCTGGTCTTC GTTGCGGCGT TCGGCACGGT ACTTGGCGTG CTCTATGTGT TCTCGCCAGA CCGCATGCGC GGCAGGATGG AGCAGATCGC CAGCGAGACT GGCACTGTCC CGGGCAACGC CGGGCAGCAG CAGGCCTGGG TCGAGAAGCT CGTGAAATGG GCGCAGCCGG TCTCGCGGCT CTCGTTGCCC AAGGAGGGTT GGGAGAATTC GCAGCTGCGC GTGCGCTTCA TGAACGCCGG ATGGCGCGAT GCGAGCGCCG CCCCGCTGTA CTTCGCCGCC AAGACGCTGC TGGCGGTGGC GCTCCCGATG ATCGGACTGA TCGCGACAAG CAGCGTCCCG GCATTCCAGG AACAGAGCAC GACGTTCGCG GTGCTGGCGG TGCTGGCCGC GATTGGTTAC TACATTCCGA ACATCGTGCT GTCCCGGAAA GTGACGGCAC GCCAGAGAAC GGTGTTCGAG GAGTTCCCCG ACGTCATCGA CCTGCTGACC GTCTGCGTGG AAGCCGGCCT CGGCCTCGAT GCCGCGCTGA TGCGCGTGGC CGACGAACTT GCGCTGCGCT GCCCGGTGCT GGCCGATGAA CTGCAACTGA TGCTGCTGGA GCTCCGCTCC GGCTTCTCGA AGGAGAAAGC GTTGAGCAAT CTGTCGCTGC GCACCGGCGT CGAGGACGTC GACAAGTTCG CGTCCATGCT GATCCAGGCG GACCGCTTCG GCACCAGCCT TGGCGAATCC TTGCGGGTGC TGTCCGACAT GCTTCGCACC AAGCGCCGGA TGCGCGCGGA AGAGCAGGCG GCGAAGATCG CGCTGAAGCT GCTGTTCCCG CTGATTTTCA CGATCTTCCC CACGCTCCTG CTGGTGTTGC TAGGACCCGC ATTCATCCAG ATCTACCGCG TATTGCTGCC AACCATGACC GGCACCAACT GA
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Protein sequence | MQDIMQGFRA DQLIVLALVF VAAFGTVLGV LYVFSPDRMR GRMEQIASET GTVPGNAGQQ QAWVEKLVKW AQPVSRLSLP KEGWENSQLR VRFMNAGWRD ASAAPLYFAA KTLLAVALPM IGLIATSSVP AFQEQSTTFA VLAVLAAIGY YIPNIVLSRK VTARQRTVFE EFPDVIDLLT VCVEAGLGLD AALMRVADEL ALRCPVLADE LQLMLLELRS GFSKEKALSN LSLRTGVEDV DKFASMLIQA DRFGTSLGES LRVLSDMLRT KRRMRAEEQA AKIALKLLFP LIFTIFPTLL LVLLGPAFIQ IYRVLLPTMT GTN
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