Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0636 |
Symbol | |
ID | 4037425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 702800 |
End bp | 703888 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637976011 |
Product | hypothetical protein |
Protein accession | YP_582791 |
Protein GI | 94309581 |
COG category | [S] Function unknown |
COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.205205 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACCCC CGAAGGAAGG TCCCTTGTTG CGAGCGTTGC TCGCCAATGC ACCTCAGATG AATTTCTTCC GACTGTGTGA ACTGATCGAG CTGTCCGTGC CGCAGCGCCC GCCGCTGGGC ACCACGGATT CCCTGGCCGA CGACCCAGTG CGCTTCCGTT CCAATGGGGG GCTTGGGTTC CCGGGGCGGG AGATCGATTT GGTCGACTAC GACGATGACT ACCCAGACCG GCCACCAGTC ATTCGCACAG CCTTCCTTGG CCTGTATGGC GTCGACGCGC GTATGCCGTC CTACTTCGTG GACGAGATTG CTCAGCGTCG TGATGGCGCA GAGTCGCTGG CGGCCTTCCT GGACCTGTTT CACCACCGCG TTGTCACGCA GTTCTACCGG GTCGCGCGCA AGTATCGCTA TCCGATGGGT TTCCTGTCGG GCGGACCGGA CGAGGTTTCA CGCTACCTGC TCAGTCTGCT CGGGCTGGGG CTGCGCGAGC CGGGAGCCGG GCGGCCCGGT GTCGAACACG TCGAACACGT CGAAGGCGCC GTCAGCCCGC GCAAACTGTT GTCGATGCTG GGACTGGCCA GCCAGCGCAC ACGGACTGCT GAGGGTCTTG CCGGCGTGTT GCAGCATGCC GTGCCGGATG CGCAGATCCT GGTGGAGGAG TTCTACCCCG TGTGGGTGCG CCTCGATGCC ACCGAGCGCA TGCCACTCGG CGAGAACTGT GTGTTGGGGC GAGGCTTCTA CGACCGTGCC AATGCGGTAC GCGTGGTGAT CACGCCCCAG ACGCCCGAAT CGGTGCTTGG GCTGATGCCG GGTCGGGCCA TGCACCGGGA GGTGATGGTG CTGTTGCGCT TCTACCTCGG CCATGCCGCG CACGCGCATC TGGAGATGCA GGTGCGGCCA GCGCTGATGC CGGCTCCGGC CCTGAACTCG AATGCGGTGA GTCTTGGGTA TAGCACGCAA CTCCAGTGCT CCGTGGCCAC CACCAACGCC AACGCGACCC GGGGAGCCGC GATCACGCGC GTGCAGTTGG GAACATGGAA TGGATTCAAT GCCGGAGCAT CCGCGCCTCT AAGCCATCGC AGTCAATGA
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Protein sequence | MSPPKEGPLL RALLANAPQM NFFRLCELIE LSVPQRPPLG TTDSLADDPV RFRSNGGLGF PGREIDLVDY DDDYPDRPPV IRTAFLGLYG VDARMPSYFV DEIAQRRDGA ESLAAFLDLF HHRVVTQFYR VARKYRYPMG FLSGGPDEVS RYLLSLLGLG LREPGAGRPG VEHVEHVEGA VSPRKLLSML GLASQRTRTA EGLAGVLQHA VPDAQILVEE FYPVWVRLDA TERMPLGENC VLGRGFYDRA NAVRVVITPQ TPESVLGLMP GRAMHREVMV LLRFYLGHAA HAHLEMQVRP ALMPAPALNS NAVSLGYSTQ LQCSVATTNA NATRGAAITR VQLGTWNGFN AGASAPLSHR SQ
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