Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0634 |
Symbol | |
ID | 4037423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 699369 |
End bp | 700940 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637976009 |
Product | ImpA-like protein |
Protein accession | YP_582789 |
Protein GI | 94309579 |
COG category | [S] Function unknown |
COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03362] type VI secretion-associated protein, VC_A0119 family |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.217357 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAATA ACCTGTTCAA CGCGCTGTTC GGCGCGCGCG CCCCCGCCGA TCTGGCCCGC TCCACGCTGG CCCGGTGGGA GCCATTGTTG CAGCCGATCC GTCAGGAGGC ACTGGTCGGA GACGACCCGG GTTACGAGGA TGACTTCCTC GCCATTAAGG AGGAAGTGGC CAAGCGCTCG GATATCAATG ATGCCTTGAT CGTGGAGTCG GCCGAGCGCT TGCTCAAGAC CAGCGCCAAG GATGTCCGCC TGGCGGTTTA CTACATCTAT GGCCGTATGA GACGCGACGG TGCGGAAGGG ATCGCCGACG GCTTCGAACT ACTGGCGGCA CTGATCGATC GCTTCGGCCC CAAGTTGCTA CCAGCCCGCG CGGAAAGCCA AAAGGCCGCA CTCGAATGGC TGGCCGGTGC CACCTTCACC GATCGGCTTG ACCGGGTGCA GGGATTCGCC GGTGGCCCGC TGGAGCGCAC GCTGTCGGCG ATGGCGCTGA TTCTGGAGGG CATCGGAAAG TGGCCCGAGC CGGCCCGTCC GGCGCTCGAA GCGCTGTTTC GCTGGTTCGA GGAACGGGTC GAAACGCCGT CGTCAGCGGA AGGTAAGGGG AACATCGCTG CTCCGAAAGC CCTTGCCACG GCGTCGCTCT TGGGCGGAGA GGTGACCTCC ACGCGCGACC TGCTGGATCG GGCGCGCCAG ATGGCATTGT TCCTGCGCCA GCAGCCTGAC GGCTATCTCG CCGCCTATCG GCTGATGCGC TGCGTGCGTT GGGACACCCT TACCGAGGCG CCGCCGCATG AAGCCAGCGG CAGGACCCGC CTGGTAGCCC CGCGCGCCGA ACTACGCGCG CAAATCAAGC GGCTGATGCT GCAAAAACAG TGGCCGGAGT TGCTCGACCG AATCGAACCG GCCTTCGCCG AGGGCGCCAA TCATTTCTGG CTGGACCTGC AGTACTACGC GTTCATGGCG CAGGACCATG CCGGTGGCGC CTACGCGCGC GTGCGCGACC TGTTGGCCAC CGACTGCGCC CTGATGCTGG AACGTCTGCC GGGCCTGGAC CAGCTTGCCT TCTCGGACGG CACGCCGTTT GCGGACGACG CCACGCTCGA ATGGATTGCG CGCTACGCCA CCGTGCGGGA TATCGAGCGC GGCGAATCCG TGTCGCCGGT TGCGGTTGCC TCCGTGAGTG CCGACTTGGC GGAAACGGAA GCGCAGGCGA TCGACCTCGC CGCACAGCAG AGTCTGGAGG CTGCCTTTGC CTGGCTGCAG GGGTTGCCGG CACCGGCTGG CGAGCGCGAT CGCTTCGTGC GGCAACTGGT GATGGCGCGT GTGGCCGAGC GCGTCGACCG GGCCGATACC GCCTTGCACT TGCTGTCCGC GCTCGAAACC GGCACCCAGC GCTATCAACT GGCCAACTGG GAGCCCTCCC TCGCGTTCGA GGTCAAGCAG CATCTGCTGC GCCTGCTGAG GGTGCGCCTC ACCCGCAAGG ACGCGGACAA GGCAGCCCTG AGCGGGCGCA TCGAGGCGCT GGTCGGCGAC CTGACCGCCA TCGATCCTGC CCGCGCCGTG GCCATCACCT AA
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Protein sequence | MFNNLFNALF GARAPADLAR STLARWEPLL QPIRQEALVG DDPGYEDDFL AIKEEVAKRS DINDALIVES AERLLKTSAK DVRLAVYYIY GRMRRDGAEG IADGFELLAA LIDRFGPKLL PARAESQKAA LEWLAGATFT DRLDRVQGFA GGPLERTLSA MALILEGIGK WPEPARPALE ALFRWFEERV ETPSSAEGKG NIAAPKALAT ASLLGGEVTS TRDLLDRARQ MALFLRQQPD GYLAAYRLMR CVRWDTLTEA PPHEASGRTR LVAPRAELRA QIKRLMLQKQ WPELLDRIEP AFAEGANHFW LDLQYYAFMA QDHAGGAYAR VRDLLATDCA LMLERLPGLD QLAFSDGTPF ADDATLEWIA RYATVRDIER GESVSPVAVA SVSADLAETE AQAIDLAAQQ SLEAAFAWLQ GLPAPAGERD RFVRQLVMAR VAERVDRADT ALHLLSALET GTQRYQLANW EPSLAFEVKQ HLLRLLRVRL TRKDADKAAL SGRIEALVGD LTAIDPARAV AIT
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