| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0600 |
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| Symbol | |
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| ID | 4037389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 646847 |
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| End bp | 650047 |
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| Gene Length | 3201 bp |
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| Protein Length | 1066 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637975975 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_582755 |
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| Protein GI | 94309545 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0654802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.436006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATTT CGGCCACCTT CATCAAGCGG CCGATCGGCA CATCGCTGCT GGCGCTCGCG
TTGCTGCTCG TTGGCCTGGC CGCGTGGCCA CTGCTGCCGA TCGCCCCGCT GCCGCAAGTG
GACTTTCCGA CCATCCAGGT CACAGTCAAC CTGCCGGGCG CCAATCCCGA GACGATGGCG
TCGAACGTGG CGCAGCCGCT CGAACGGCAG TTCTCGCTGA TCGCGGGGCT GTCGCAGATG
ACGTCGACCA GCGCGCAAGG CACCACGCAG ATCACGCTGC AGTTCGACCT GAACCGCAGC
ATCGACGCCG CCGCCGTGGA CGTGCAGGCC GCCATCAACG CCGCGGGCGG CCAGCTTCCG
TCCAACCTGC CGACACCCCC GACGTTCCGC AAGATCAACC CCGCCGACGC GCCGATCCTG
GTGCTGGCGG TGCAGTCCGA CGCGCTGCCG CTGACCACCG TCAACGACTT CGCCGACAAC
ATCCTGGCGC AGCAGATCTC GCAGATCGAA GGCGTCGGCC TGGTCAACAT TGGCGGCCAG
CAGAAGCCGG CCGTGCGCAT CCAGGTAGAC CCGGCCAAGC TCGCGTCGAT GGGCCTGAGC
ATGGAAGACA TCCGTGGCGT GATCGCGGCG ACCACGGTCA ACCAGCCAAC CGGCGCCACC
GATGGCGCGA CCAAGGCCTT CAACGTCTAC ACCAACGACC AGATCACCCG CGCGGCGCCG
TGGAACGACA TGGTGCTGGC GTGGCGCAAC GGCGCCCCGG TGCGCGTGCG CGATGTCGGC
GTGGCGGTGG ATGGCCCGGA GAACAACCGG CTCGCGGGCT GGGCGTTCGC CGGCGCCGCC
GCCCCCGCTG ACAACACGTT CCACAACGGC CGCGCGATCA TCCTGGCCGT GACCAAGCAG
CCGGGCGCCA ACGTGATCGC CACGGTGGAC CGCATCAAGG CCGCCCTACC CCGCCTGCAG
CTTTCGATTC CGGCCGCGGT CAACGTCAAC GTGCTGGCAG ACCGCACGCA GAACATCCGC
GCCTCGGAAG CCGATGTCGA GTTCACGCTG ATCCTGACCA TCGTGCTGGT GGTCGGCATC
ATCTTCGTGT TCCTGCGCGA CGTATGGGCC ACGGTGATCC CGAGCATCAC CGTGCCGCTG
GCGCTGCTGG GCACGGCCGG AGGCATGTAC CTGCTGGGCT ACAGCCGCGA CAACCTGTCG
CTGATGGCGC TGACGATTGC CGTGGGCTTC GTCGTCGATG ATGCGATCGT GATGCTTGAG
AACATCTATC GCCACGTGGA AGCGGGCATG TCGCCGCTGG AGGCTGCGCT GCAGGGTGCC
GGCGAGATCG CGTTCACGAT CGTGTCGATC TCTGTGTCGC TGGTGGCCGT GTTCATCCCG
CTGCTGCTGA TGGGCGGCAT CGTCGGCCGG CTGTTCCGCG AATTCGCGGT CACGGTGACG
CTGACGATCG CGGTATCGGT GATCGTCTCG CTGACGCTGA CGCCGATGAT GTGCGCAAAA
TTCCTGCAGC CGCACGACCC GGCCCACGCC CGCCATCACG GACGGCTCTA CCTGATGTTC
GAGCGCGGCT TCGATGCGAT GCTCGGTGCG TACCGGCGCG GGCTCGATCA CGTGCTCGAT
CACCAGTTCC TGACGTTGTG CGTGTTCCTG CTGACCGTGG CCACCACGGT AGTGCTGTTC
GTGATCATCC CGAAGGGCTT CTTTCCCCAG CAGGACACCG GCTTCGTGTT CGGCACCGCG
GAGTCCGCGC AGGACGCATC ATTCAAGTCG ATGAACGCGC GCATGGTGGC GCTGGCGGAC
GTGGTCCGCA GCGACCCCGA CATCTCGGCC GTCGGCATGA CCGGCGGGCA GAACACGGTC
AACACTGGCA ACTTCTTCAT CGCGCTGCGC CCGAAGGAGG AAGGCCGCAC GGCCACGGCT
GACGAGATCA TCGCGCGGCT GCGACCGAAG CTGGCCAAGG TGGAGGGCGC CAACCTGTTC
CTGCAAGCCG GACAGGACAT CAACGTTGGC GGGCGGCTGT CGCGCACGCA GTACCAGTAC
ACGCTCACCG ACGCCAACCT CGCCGAACTC AACGACTGGG CGCCGCGCGT CCTGGAGCGG
TTCCGCCAGT TGCCGCAACT GGCCGACGTA GCGTCCGACC AGCAGAACTC CGCGGCCGCG
GCCATGCTGA CGATCGACCG CGCGCGGGCG TCGAGCTTCG GCATCACACC GGCGCTGATC
GACGCCACGA TCTACGACGC GATCGGCCAG CGCCAGGTGG CACAGTACTT CACGCAGATC
AACAGCTACC ACGTGGTCCT CGAAGCCACG CCACAATTGC AGGACGACCC GCGCCTGTTC
GACAAGCTCT ACCTGACGTC CCCGATCACC GGCGAGCAGG TGCCGCTATC GTCGTTCGTG
AAGATCGACA CGAACCGCAC GGCCTACCTG GCGATCGGCC ACCAGGGGCA GTTCCCGGCG
GTGACCATCT CGTTCAACCT GGCGCAGGGC GCGTCGCTGG GTGACGCCGT GGAGGCCATC
AACAAGGCCC TGGCCGGCAT GGGGCGGCCA CGCACGCTCG GCGGCGCGTT CCAGGGTACC
GCGCAGGCAT TCGGCGCGTC GCTCGCTTCG CAGCCCTACC TGATCGCCGC CGCGCTGATC
GCGGTGTACA TCGTGCTGGG GCTGCTCTAC GAGAGCTATA TCCACCCGCT GACGATTCTT
TCGACGCTGC CGTCCGCCGG CGTCGGCGCG CTGCTGGTGC TGATGCTGGG TGGCTACGAC
TTCACCGTGA TCGCGCTGAT CGGGATCATC CTGCTGATCG GCATCGTCAA GAAGAACGGC
ATCATGATGG TCGACTTCGC GCTGGTGGCC GAGCGCGAGC GCGGCATGTC TCCGCGCGAC
GCGATCTACG AGGCGTGTCT GCTGCGCTTC CGCCCGATCA TGATGACCAC GATGTGCGCG
CTGCTGGCGG GGCTGCCGCT TATGCTCGGG CACGGCGCGG GGTCCGAACT GCGTCGGCCG
CTGGGCTACG CGATGGTCGG CGGGCTGGTG GTGTCGCAGA TGCTCACGCT GTTCAGCACG
CCGGTGGTCT ATCTCTACCT GGATCGCGCG CACTATTGGT ACATGCGCCG CAAGGCCGCG
CGCGGCGGCG GCAAGCCGCC ACCCACGCAA CAAACACCGC ACGGCAAGTC GCACGAGTAC
ATGGGTGGAG AGGGCGAGTG A
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| Protein sequence | MSISATFIKR PIGTSLLALA LLLVGLAAWP LLPIAPLPQV DFPTIQVTVN LPGANPETMA
SNVAQPLERQ FSLIAGLSQM TSTSAQGTTQ ITLQFDLNRS IDAAAVDVQA AINAAGGQLP
SNLPTPPTFR KINPADAPIL VLAVQSDALP LTTVNDFADN ILAQQISQIE GVGLVNIGGQ
QKPAVRIQVD PAKLASMGLS MEDIRGVIAA TTVNQPTGAT DGATKAFNVY TNDQITRAAP
WNDMVLAWRN GAPVRVRDVG VAVDGPENNR LAGWAFAGAA APADNTFHNG RAIILAVTKQ
PGANVIATVD RIKAALPRLQ LSIPAAVNVN VLADRTQNIR ASEADVEFTL ILTIVLVVGI
IFVFLRDVWA TVIPSITVPL ALLGTAGGMY LLGYSRDNLS LMALTIAVGF VVDDAIVMLE
NIYRHVEAGM SPLEAALQGA GEIAFTIVSI SVSLVAVFIP LLLMGGIVGR LFREFAVTVT
LTIAVSVIVS LTLTPMMCAK FLQPHDPAHA RHHGRLYLMF ERGFDAMLGA YRRGLDHVLD
HQFLTLCVFL LTVATTVVLF VIIPKGFFPQ QDTGFVFGTA ESAQDASFKS MNARMVALAD
VVRSDPDISA VGMTGGQNTV NTGNFFIALR PKEEGRTATA DEIIARLRPK LAKVEGANLF
LQAGQDINVG GRLSRTQYQY TLTDANLAEL NDWAPRVLER FRQLPQLADV ASDQQNSAAA
AMLTIDRARA SSFGITPALI DATIYDAIGQ RQVAQYFTQI NSYHVVLEAT PQLQDDPRLF
DKLYLTSPIT GEQVPLSSFV KIDTNRTAYL AIGHQGQFPA VTISFNLAQG ASLGDAVEAI
NKALAGMGRP RTLGGAFQGT AQAFGASLAS QPYLIAAALI AVYIVLGLLY ESYIHPLTIL
STLPSAGVGA LLVLMLGGYD FTVIALIGII LLIGIVKKNG IMMVDFALVA ERERGMSPRD
AIYEACLLRF RPIMMTTMCA LLAGLPLMLG HGAGSELRRP LGYAMVGGLV VSQMLTLFST
PVVYLYLDRA HYWYMRRKAA RGGGKPPPTQ QTPHGKSHEY MGGEGE
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