| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0583 |
|---|
| Symbol | |
|---|
| ID | 4037372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 624405 |
|---|
| End bp | 625535 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637975958 |
|---|
| Product | CBS domain-containing protein |
|---|
| Protein accession | YP_582738 |
|---|
| Protein GI | 94309528 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3448] CBS-domain-containing membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0461407 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.660708 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCAG CATTCGACTT ATCCACTTCC GTTGCCGGAA CACGTGCGTG GTTACGCACT
TTCGTCCCCA TGCCCATCGC GGCGAGCCGC CGCGAGCGCA TCAAGAGCTG CATCGGCGCA
CTGATCGGCC TGTTCCTCAC GGAATGGATC TGCCGCCACT TCCTGCAGGG CTTCAACCCG
TGGTTCGTGG CGCCGATGGG CGCGTCGGCA GTGCTGCTGT TCGCCGTGCC GGCCAGTCCG
CTGGCACAGC CGTGGTCGAT CATCGGCGGC AACCTCGTGG CCGCCACGGT CGGCGTGGCC
TGCGTGCGCT GGATTCCGGA GCCGGGGCTG GCCGCCGGCG TGGCCGTCGC GGTGGCCATC
GCGCTGATGT TCCAGCTTCG CTGCGTGCAC CCGCCCAGCG GCGCGGTGGC GATCACCGCC
GTGTTTGGCG GACCTGCCGT GCAGGCGCTC GGTTTCGGCT TCGTGGTGGC GCCGGTCGCG
ATCAACTCGG CGCTGCTGCT TCTGACGGCG CTGGCGTTCA ACAACCTCAT GCAGCGCCGC
TATCCGCACC GGCCGCCCGA GCCGCCCTCG CAGCACCTGA CCAAGGATGT GCCGCCCAGC
CGGCGCGTGG GCTTCACACG CGCGGACCTG GATGCGGTGC TGGCTGCACG CGGTGAATTC
CTGGACATCG AGGAAGACGA TCTCGAGGCG ATCCTGGTGG CCGCCGAACT GCGCGCCTAC
TCGCGCCGCT TCGGCGACGT GCGTTGCAGC GACATCATGT CGCGCGACGT GGTGGCCGTG
CGCCCCGGCC AGCGCGCGGC CGATGCCGCC GCGCTGCTGG CGCGCCACCA CATCAAGGCG
CTACCTGTGG TGGACGGCAA TCGCCGCCTG CTCGGTATCG TGACGCAGAG CGATTTCTTC
CGCGCGCATC GTTCGAACTC GCGCCGTGTC AACGGCACCG TGCGCGATCT GATGACGCGC
GTGGTGGTGA CCGCGCATGT CGACCAGCCG ATGGTGGAAC TGGCGCACGC GTTCTCCGAT
GGCGGGCTGC ACCATGTGCC CGTGGTCGAT GGAGACCGGC ACGTCGTGGG CATGGTGACC
CAGTCGGATC TGGTAGCTGC CCTGCTGCGC CGGGACACCA CCGCAAACTG A
|
|---|
| Protein sequence | MPAAFDLSTS VAGTRAWLRT FVPMPIAASR RERIKSCIGA LIGLFLTEWI CRHFLQGFNP
WFVAPMGASA VLLFAVPASP LAQPWSIIGG NLVAATVGVA CVRWIPEPGL AAGVAVAVAI
ALMFQLRCVH PPSGAVAITA VFGGPAVQAL GFGFVVAPVA INSALLLLTA LAFNNLMQRR
YPHRPPEPPS QHLTKDVPPS RRVGFTRADL DAVLAARGEF LDIEEDDLEA ILVAAELRAY
SRRFGDVRCS DIMSRDVVAV RPGQRAADAA ALLARHHIKA LPVVDGNRRL LGIVTQSDFF
RAHRSNSRRV NGTVRDLMTR VVVTAHVDQP MVELAHAFSD GGLHHVPVVD GDRHVVGMVT
QSDLVAALLR RDTTAN
|
|---|
| |