| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0574 |
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| Symbol | |
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| ID | 4037363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 614604 |
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| End bp | 617162 |
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| Gene Length | 2559 bp |
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| Protein Length | 852 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637975949 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_582729 |
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| Protein GI | 94309519 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACTC GGAAGCCGCG CGCCTCGCGC GCTCTGGCTG CGCGTTGGAT CCTGGCCACC
GCTCTGCCCA CCGCGGTATT TGCTAATGAA CCCGGCAAGA CGGCCACCAT CGCAGCCGTC
AAGTTCAATT CAGATTTTCT GAAACGTTCC GATGGCACCA GCGTCGATGT CAGCCGGTTT
GCGTTTGGCA ACCCCATCTC ACCTGGCGAC CATGCGGTCG ACATCTACCT GAACGGATCG
TGGGTTGGTC GAGAGACAGT GCGATTCCGG TCCCGGGACG AGGTTGTCGG CCCATGCATG
GACCGATCGC TCATTACCCG GTTGAATCTC GACGAACAGG CGCTGCCACC CGCCAGCCGC
AATGCGATAG CGCAGGCCGT CAGTGGCGAA TGCACTCGCC CATCGGACAT CTCGGAAGAC
CTCACCTGGT CGTTCAACCT CAATGACCTG CGTCTCGACA TCGGCGTGGC GCAGGCATTG
TTACGCCGCA CGCCGCGCGG CAGCGTCAGC CCAGAGCTCC TGGATGATGG CGTCCCGTCC
GCGACGGTCG CCTACAATTT CAACACGTTC CACACTACTG GTAGCTCATC TGTCACTTCT
ACCTACCTTG GCATCGATTC CGGATTAAAC ATCGGTGCCT GGCACCTGCG GCAGCGCTCC
TCGATGAGTT GGCAGTCCAT GGGCCAAAGC ACCTACGACT ACCAGAACAT CGCGACCTAT
TTGCAGCGGG ATATATCGCG CCTGCGTAGT CAGCTCACCG TTGGCGATGC CTACACGGAT
GGAGCCGTCT TCGACAGCTT TTCCGTGCGC GGCGTGAATC TGGCCAGCGA TGACCGGATG
CTTCCTGACT CCGCACGCGG CTATGCGCCA CTGGTGCGAG GCGTCGCCCG CTCCAATGCG
CGTGTCACGG TCACGCAGAA TGGCAACAAG CTCTATGAAA CGACCGTGGC GCCAGGACCG
TTCGAGATCA AGGATCTCTA CGCCACCGGT TATGGCGGCA ATCTGCTCGT CACGGTGACA
GAAGCCGACG GCAGCCAAAG CAGCTTTACC GTGCCCTATG CATCTGTGGC TCAGCTTCTA
CGGCCCGGTA TCACGCGGTA CTCGGCCACG GTTGGGGAGT ACCGCGATGG CTCGCGCACG
TCTTCCCGCC GCGAGAAACT GGTCCAGGGT ACGGTGCAGC ACGGGTTCAA CAACTTCGTA
ACGGGCTATG CCGGGCTAGT CCTCTCGGAG GGCTACCGGG CGGGCCTGAT CGGCGCGGCC
TTGAATCTGC CCATTGGCGC ATTCGCGCTG GATGCGACCC ATGCCCACGC CTCGATCGAC
CAGGTTGACA ACACCAGCGG ACAAAGCGTG CGCCTCAGCT ACAGCAAGTT CGTGCCGTCA
ACTAGCACGA GTATGTCACT CGCCGCCTAT CGCTATGCGA CCCGTGGCTT CTGGACGATG
AGCGACGCAT TCACGGCTCG CGCCAGCGGT GGCAATGCCC GCGCCGTGGA CCGCCAGCGC
AGCCAGGTCC AACTCACGCT GAATCAGAGT CTCGGAGATC GCTGGGGCAA CTTCTATCTC
ACAGGCACTT CCGCGGAATA CTGGAATCGG GGCGGTACTG CGCTGATGTT CCAGGTGGGC
TACAGCAACT CGCTGCGTGT GCTGGGACTG CCGATGACCT ACAACATCGC GGCCTCACGC
CAACGCGAGG CGATGACCGG CCGGTTCACC ACCCAGGTTT TCGCCAGCCT CACCGTACCG
CTGGGCAAGA GCAGCCACGC CCCGATGCTG TCGTTCGGCG CCACGCATAG TGACAGCCAA
TCCTCGCAAC AGATGCGGCT GAGCGGCACT GCACTCGAGG ACAACGCCTT CACCTATGGC
CTGAACGTCG ACCGTTCGCC GAACACAACC ACCGGCGGTG GCAACGTACA GTACCGGACG
CCTTACACCA CCGTTTCCGC TTCTGTCAGC GGCGGCGGCG GTTACACGCA ATACTCGGGT
GGCCTGCAAG GCGCCCTGGT CGCCCACCAA GGAGGCATCA CACTTGCCAA CTTCCTTGGC
GACACCATCG GCATCGTCGA AGCAAAGGGC GCTACCGGCG CGCGCGTCGC CAATGCGACG
GGCGTCAGGA TCGACGCATT CGGCTACGCC ATTGTGCCGT ACCTCCAGCC TTACAACATG
AACACGATCG AGATAGATCC ACGCGGGATA CCGCTGGATG TATCGCTGGA CGCGACCAGC
GCCCAGGTAG CGCCGCGCGC GAACGCAGCG GTAAAAATCA AGTTCGCCGC GCTCAGCGGA
CGCGCCGTCA TCATTTCAGC CAGCCAGCCC GATGGAGCGC CTTTGCCCTT TGGCGCATCA
GTGCGCGATA GGGACAATGC CGAAATCGGC GTGGTTGGCC AAAGCGGCAT CATTTTCGCG
CGTGGCATCG AAGACACCGG ACGCTTGCAG GTGTCCTGGG GCACACACTC AGCGCAACGC
TGCACGATCG AATATCGGCT GCCGGAGAAG GTCCGCAATG CGACATCATT CACGCAGATC
CGATCGGTAT GCCAGCCCGA CGCAAAGGGG GAATCGTGA
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| Protein sequence | MRTRKPRASR ALAARWILAT ALPTAVFANE PGKTATIAAV KFNSDFLKRS DGTSVDVSRF
AFGNPISPGD HAVDIYLNGS WVGRETVRFR SRDEVVGPCM DRSLITRLNL DEQALPPASR
NAIAQAVSGE CTRPSDISED LTWSFNLNDL RLDIGVAQAL LRRTPRGSVS PELLDDGVPS
ATVAYNFNTF HTTGSSSVTS TYLGIDSGLN IGAWHLRQRS SMSWQSMGQS TYDYQNIATY
LQRDISRLRS QLTVGDAYTD GAVFDSFSVR GVNLASDDRM LPDSARGYAP LVRGVARSNA
RVTVTQNGNK LYETTVAPGP FEIKDLYATG YGGNLLVTVT EADGSQSSFT VPYASVAQLL
RPGITRYSAT VGEYRDGSRT SSRREKLVQG TVQHGFNNFV TGYAGLVLSE GYRAGLIGAA
LNLPIGAFAL DATHAHASID QVDNTSGQSV RLSYSKFVPS TSTSMSLAAY RYATRGFWTM
SDAFTARASG GNARAVDRQR SQVQLTLNQS LGDRWGNFYL TGTSAEYWNR GGTALMFQVG
YSNSLRVLGL PMTYNIAASR QREAMTGRFT TQVFASLTVP LGKSSHAPML SFGATHSDSQ
SSQQMRLSGT ALEDNAFTYG LNVDRSPNTT TGGGNVQYRT PYTTVSASVS GGGGYTQYSG
GLQGALVAHQ GGITLANFLG DTIGIVEAKG ATGARVANAT GVRIDAFGYA IVPYLQPYNM
NTIEIDPRGI PLDVSLDATS AQVAPRANAA VKIKFAALSG RAVIISASQP DGAPLPFGAS
VRDRDNAEIG VVGQSGIIFA RGIEDTGRLQ VSWGTHSAQR CTIEYRLPEK VRNATSFTQI
RSVCQPDAKG ES
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