Gene Rmet_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0562 
Symbol 
ID4037351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp601556 
End bp602773 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content67% 
IMG OID637975937 
Productacetate kinase 
Protein accessionYP_582717 
Protein GI94309507 
COG category[C] Energy production and conversion 
COG ID[COG0282] Acetate kinase 
TIGRFAM ID[TIGR00016] acetate kinase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACTG CTCATCCCGT CATCCTCGTC GTCAACGCTG GCTCGTCGAG CGTCAAGATT 
TCCATCTTCT CCGTGCCGGA GGCTGCTCAC GAGGACGTCG AAGTCCTGCC CGCGCAGCTT
GCGCACGGTC AGATCGAAGG TATCGGCGTG GCGCCGCATA TCGAGGGGCG CCTGGCCGAT
GGAACCGTCG TCGCCGACGA GCGCTTTCCC GTGGAGCTGG TGCCCGATCA CGATGCGGCG
TTCCGCCTGA TCCAGGCCAG GCTGCAGGAA GGCCTGCGCG ACACGCCGCC GGTAGCGATC
GGCCATCGCG TGGTGCATGG CGGCATGGAC TTTGCCGACG CCGTGCGCAT CGACGACAAC
GTGATCGCCA GGCTCGATGC GCTGGTACCG CTGGCACCGC TGCACCAGCC ACACAACCTG
ACGGCGATCC GCGCGGTGCG GGCCGCCGCG CCCGACCTGT TGCAGGTGGC GTGCTTCGAC
ACCGCGTTCC ACGCCGGGCA CGATCCGATG GCCCAGTTGA TGGCGCTGCC CTACGAGTAC
TACGAGCAGG GCATCCGGCG TTTCGGCTTT CATGGGCTGT CCTACGCGTA TATCGCGCGC
CGGCTCAAGC AGGTGGCGCC CGACTTGGCC GAGGGCCGCG TGATCGTTGC CCACTTCGGC
AATGGCGCGA GCCTGTGCGC GATGCGCGGC GGCAAGAGCG TGGAATCGAC CATGGGCCTC
ACGGCGCTGG ACGGCATGCC GATGGGCACG CGCTGCGGCA CGATCGACCC CGGCGCGGTG
CTGTGGCTGG CGGCGCAAGG GATGACGCCC GACGCAATCC AGGCGATGCT CTATGGGCAA
TCTGGCCTGA AGGGTATCTC CGGCGTCAGC AGCGACATGC GCGCACTGCT GGCCAGCGAT
ACGCCGCGCG CGAAGCTGGC CGTGGACTTC TACGCCTATC GCGCCGCACA GGAAATCGGC
AAGCTCGCGG TCACGCTGGG TGGCCTGGAT GGACTGGTCT TCACGGCTGG TATCGGCGCC
AACTCGCCGG ACGTGCGCGC ACGCGTCTGC GCGCACCTCA CCGATCTCTT CGGCATCTCG
CTGGATGCCG CGGCCAATGG CGACAACTGC CAGCGCATCA GCAGCGACAC AAGCCGCGTG
CCGGTGCTGG CGCTGCAGAC GGACGAGGAA GGCATGATCG CCCTCTCGAC CGCGAAGATC
CTGCTAAACG GCGGCTAA
 
Protein sequence
MTTAHPVILV VNAGSSSVKI SIFSVPEAAH EDVEVLPAQL AHGQIEGIGV APHIEGRLAD 
GTVVADERFP VELVPDHDAA FRLIQARLQE GLRDTPPVAI GHRVVHGGMD FADAVRIDDN
VIARLDALVP LAPLHQPHNL TAIRAVRAAA PDLLQVACFD TAFHAGHDPM AQLMALPYEY
YEQGIRRFGF HGLSYAYIAR RLKQVAPDLA EGRVIVAHFG NGASLCAMRG GKSVESTMGL
TALDGMPMGT RCGTIDPGAV LWLAAQGMTP DAIQAMLYGQ SGLKGISGVS SDMRALLASD
TPRAKLAVDF YAYRAAQEIG KLAVTLGGLD GLVFTAGIGA NSPDVRARVC AHLTDLFGIS
LDAAANGDNC QRISSDTSRV PVLALQTDEE GMIALSTAKI LLNGG