Gene Rmet_0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0553 
Symbol 
ID4037342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp590893 
End bp591402 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content68% 
IMG OID637975928 
ProductNADH dehydrogenase (ubiquinone), 24 kDa subunit 
Protein accessionYP_582708 
Protein GI94309498 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.469844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.235465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGATA CCATCCCCAC CGGCGGTGAC GCCGCGGGCG TTGCCGACGC CGTCGCACGC 
ATCGTGGCCG CCCGGCGCGA TATGCCAGGC GCGCTGCTGC CGATCCTGCA CGACATCCAG
GACAGCCAGG GTTTCATTCC GGCCGATGCG GTATCGGTCG TCGCACGCGC GCTCAATCTG
TCGCGCGCCG AGGTCCATGG CGTGATCACG TTCTATCACC ACTTCCGCGA GCGGCCGGCT
GGCCGTACCG TGGTGCAGGT CTGTCGCGCA GAGGCTTGCC AGTCCGTCGG CGCCGACGCG
CTTGCCGCCC ATGCGCGCAA GGCACTCGGG TGCGACTTCC ACGAGACCAC CGCGGATGGC
CAGTTCACGC TCGAGCCGGT CTACTGCCTC GGCCAGTGCG CCTGCGGCCC GGCAATGACG
ATCGGCGATC GTTTGCATGG GCGCGTCGAC ATGCAGCGAT TCGACAAGCT GATCGACGCA
GTCCGCGAGC GCGAGGAGGC CCAGGCATGA
 
Protein sequence
MPDTIPTGGD AAGVADAVAR IVAARRDMPG ALLPILHDIQ DSQGFIPADA VSVVARALNL 
SRAEVHGVIT FYHHFRERPA GRTVVQVCRA EACQSVGADA LAAHARKALG CDFHETTADG
QFTLEPVYCL GQCACGPAMT IGDRLHGRVD MQRFDKLIDA VREREEAQA