Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0531 |
Symbol | |
ID | 4037320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 566573 |
End bp | 567331 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637975906 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_582686 |
Protein GI | 94309476 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0151424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000559523 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACATTC AGGGCAACGT ATTCATTGTC ACGGGCGGCG CATCCGGGCT CGGCGCGGGC ACGGCGCGCA TGCTGGCGGC TGCGGGCGGC AAGGTCGTGA TTGCCGACCT CAACGAAGCC GCGGGCACGG CGCTGGCCAC GGAGCTCGGC GGGCAGTTCG TCAAATGCGA CGTGGCGTCG GAGGCCGACG GTCAGGCGGC CGTGGATGCC GCGCGGAAGC TTGGCCGGCT CTCCGGGCTG GTCAACTGCG CGGGTATCGC CGTGGCCGCC AAGACGGTCG GCAAGAACGG ACCGCATCCG CTCGATGCGT TCGAGAAGAC CATCCGCGTC AACCTGATCG GCACCTTCAA CATGATTCGC CTCGCCGCCG CGGAGATGGT CCAGAACACT CCCGATGCCG AAGGCGAACG CGGCGTGATC ATCAATACGG CCTCGGTGGC CGCGTTCGAT GGCCAGATCG GCCAGGCTGC GTATGCGGCA TCGAAGGGCG GCGTGGTGGG CATGACGCTG GCCATCGCGC GCGATCTTTC CCGCGACGGC GTGCGCTGCC TGACCATCGC CCCGGGGTTG TTCGAAACAC CGATGCTGCT CGGGATGCCG CCAGAGGTGC AAGAGGCGCT CGGCAAGATG GTGCCGTTCC CGCCGCGCCT GGGCCGCCCC GCGGAGTACG CCAAGCTGGT CCAGTCGATC ATCGGCAATA CGATGTTGAA TGGCGAAGTG ATCCGCCTGG ATGGTGCAAT CCGCATGCAG CCGAAGTAA
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Protein sequence | MDIQGNVFIV TGGASGLGAG TARMLAAAGG KVVIADLNEA AGTALATELG GQFVKCDVAS EADGQAAVDA ARKLGRLSGL VNCAGIAVAA KTVGKNGPHP LDAFEKTIRV NLIGTFNMIR LAAAEMVQNT PDAEGERGVI INTASVAAFD GQIGQAAYAA SKGGVVGMTL AIARDLSRDG VRCLTIAPGL FETPMLLGMP PEVQEALGKM VPFPPRLGRP AEYAKLVQSI IGNTMLNGEV IRLDGAIRMQ PK
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