| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0513 |
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| Symbol | |
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| ID | 4037302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 546893 |
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| End bp | 550048 |
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| Gene Length | 3156 bp |
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| Protein Length | 1051 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637975888 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_582668 |
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| Protein GI | 94309458 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0135048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.800803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCT CACGCATCTT TATCGAGCGG CCAGTCGCCA CAGCGCTGCT GATGGTGGCC
ATCCTGCTGT CGGGGCTGGT CGCATTCCGG CTGCTGCCGC TCTCGGCCCT GCCCGAGGTG
GACTACCCGA CCATCCAGGT CACCACGCTC TACCCCGGCG CCAGCCCCGA CGTGATGACC
TCGTCGGTCA CCGCGCCGTT GGAACGCCAG TTCGGCCAGA TGCCTGGCCT AAAGCAGATG
TCGTCGTCCT CCTCCGGCGG CGCATCGGTG ATCACGCTGC AGTTCGAGCT GACACTGTCG
CTCGACGTGG CCGAACAGGA AGTGCAGGCC GCCATTAACG CGGGCAGCAA CCTGCTCCCG
GCTGACCTGC CAATGCCGCC GATCTACAGC AAGGTCAACC CGGCCGACGC GCCGATCATG
ACGCTGGCGA TGACGTCCGA CACGCTGCCG CTGCCCAAGC TGCAGGACAT GGTCGACACG
CGCGTGGCCG CCAAGATCTC GCAGATCCAG GGCGTGGGCC TGGTCACGAT CAGCGGGGGC
CAGCGCCCCG CCGTGCGCAT CCAGGCCAAT CCGACGGCGC TGGCCAACCT CGGCATGTCG
ATCGACGACC TGCGCACCGC CATCGGCAAT GCGAACGTGA ACGGCGCCAA GGGCAGTTTC
GACGGCCCCG CGCGCGCGTC GACAATCGAC GCCAATGACC AGCTCAAGTC GGCCGACGAA
TACAAGCAGA TCATCATCGG CTACCAGAAC GGCGCGCCGA TCCGCATCAC CGACGTGGCC
GACATCGTCG ATGCGGCCGA GAACAGCCGC CTGGCCGCAT GGGCCAACGC CAAGCCGGCC
ATCGTGCTGA ACATCCAGCG CCAGCCCGGC GCCAACGTGA TCGAGGTGGT CGACCGCATC
AAGACGCTGA TGCCCCAGTT GCGGGCGTCG CTGCCGGCCT CCGTGCAGGT GCAGCAGCTG
ACCGACCGCA CCACCACAAT CCGCGCCTCG GTCAAGGACG TCGAGTTCGA ACTGCTGCTG
GCCGTCGCGC TGGTGGTGAT GGTGATCTTC ATCTTCCTGC GCAACCTGTC CGCCACGATC
ATCCCGGGGG TGGCGGTGCC GCTGTCGCTG GTGGGCACGT TCGGCGTGAT GTACATGGCC
GGCTTCTCGA TCAACAACCT CACGCTGATG GCACTGACCA TCGCCACCGG CTTCGTGGTG
GACGACGCCA TCGTGATGAT CGAGAACATC ATGCGCTACA TCGAGGAAGG CGATCCGCCG
ATGGAAGCGG CGCTGAAGGG CTCGAAACAG ATCGGCTTCA CCATCATCTC GCTGACGTTC
TCGCTGGTGG CCGTGCTGAT TCCACTGCTG TTCATGGGCG ACGTGGTCGG CCGGCTGTTC
CGCGAGTTCG CCATCACGCT CGCCGTGTCG ATCCTGATCT CCGCAGTGGT CTCCCTGACG
CTGACGCCGA TGATGTGCGC GCGTCTGCTG CGTCACGTGC CCGAGAGCGA AATGTCCCGC
TTCCACGTGG TCACGGGCCG CTTCTTCGAC AGCGTGATCG AACAATATGG CCGCGCGCTG
AACTGGGTGC TCGAGCGCCA GACGGCCACG CTGCTCGTCG CCGTGGGCAC ACTGGTGCTG
ACCGGCCTTC TCTACGTGGT GGTGCCGAAG GGTTTCTTCC CGGTGCAGGA CACGGGCATG
ATCCAGGCGA TCACCGAAGC CGCGCAGACC AGTTCGTTCC AGTCGATGGG CCGCAAGCAG
GAGGCGGTGC AGAAGGTGAT TCTCGAGGAC CCCGCCGTGG ATAGCGTGTC GTCGTTCATT
GGTGTCGACG GCACCAACAC GACGATCAAC GCGGGCCGCA TGATCATCAA TCTGAAGCCG
AAGGACGAAC GCGACTCGAT GGCAGTCGTG ACCGACCGGC TGCAGGCCTC GGTGCAGAAG
CTTGGCGGCG TGGCGCTGTA CATGCAGCCG GTGCAGGACC TGACAATCGA GGACCGCGTG
GCCCGCACGC AGTACCAGTT CACCGTCGAG GACCCGGACC CAGCCGTGCT GGCCGAATGG
GTACCGAAGC TGATTGAGCG GCTGAAGCAG GAGCCGGAAC TGCGCGACGT GGCCAGCGAC
CAGCAGAACA ACGGCCTGCG CGCCTACGTG GAGATCGACC GCGACGCCGC CGCGCGTTTC
GGCATCACCA CCGCGGTCAT CGACAGCGCG CTCTACAGCG CGTTCGGCCA GCGGCTGGTC
TCGACGATCT TCACGCAGTC GAGCCAGTAT CGCGTGGTGC TGGAAACGAT GCCGCAATTC
CGGGTGAGCC CGGAGTCGCT GTCCGCGCTG CGCCTGCCGT CGTCGTCGGG CGGCCAGGTG
CCGCTCGGGT CGATCGCGCA CATCTCGGAG CGCACCGGCC CGCTCGTGAT CAATCACCAG
GGCCAGTTCC CGTCCGCGAC GATCTCGTTC AACCTCGCGC CGGGTGAATC GCTTGGCGCG
GCGGTGGACA AGATCACCAA GGTCGAGAGC GAGATTGGCC TGCCGATCTC GATGGCCACC
GAGTTCCAGG GCGCCGCTCT GGCCTTCCGC GCGTCGCTCT CCAACACCCT GTGGCTGATC
CTGGCCGCTG TGGTCACGAT GTACATCGTG CTCGGTGTGC TGTATGAAAG CACGATCCAT
CCGGTGACCA TCCTCTCGAC GCTGCCGTCG GCCGCCGTCG GCGCCCTGCT GGCGCTGCTG
GTGTCGGGGC AGGATATCGG CATCATCGCG ATCATCGGCA TCATCCTGCT GATCGGTATC
GTGAAGAAGA ACGCGATCAT GATGATCGAC TTCGCGCTTG AGGCCGAGCG CGAAGGCGGC
ATGAAGCCGC GCGATGCGAT TTTCCAGGCC TGTCTGCTGC GCTTCCGCCC GATCCTGATG
ACGACGATGG CCGCACTGCT GGCTGCGTTG CCGATGATGC TCGGCACGGG CATCGGCTCG
GAACTGCGCC GTCCGCTGGG TATCACGATG GTGGGTGGCC TGCTGGTCAG CCAGGTGCTG
ACGCTGTTCA CCACGCCGGT GATCTACCTG GCGTTCGACC GCGTCGCGAT CCGCCTGAAG
GCCTGGCGCC GCAACCGCTT CGGTGACCCC GATGAGGGCG GCACCGGAGA GGATGGCGGC
CAGCAGCCGC ACCGTCCGCA GGAGCCGAAC GTCTGA
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| Protein sequence | MNPSRIFIER PVATALLMVA ILLSGLVAFR LLPLSALPEV DYPTIQVTTL YPGASPDVMT
SSVTAPLERQ FGQMPGLKQM SSSSSGGASV ITLQFELTLS LDVAEQEVQA AINAGSNLLP
ADLPMPPIYS KVNPADAPIM TLAMTSDTLP LPKLQDMVDT RVAAKISQIQ GVGLVTISGG
QRPAVRIQAN PTALANLGMS IDDLRTAIGN ANVNGAKGSF DGPARASTID ANDQLKSADE
YKQIIIGYQN GAPIRITDVA DIVDAAENSR LAAWANAKPA IVLNIQRQPG ANVIEVVDRI
KTLMPQLRAS LPASVQVQQL TDRTTTIRAS VKDVEFELLL AVALVVMVIF IFLRNLSATI
IPGVAVPLSL VGTFGVMYMA GFSINNLTLM ALTIATGFVV DDAIVMIENI MRYIEEGDPP
MEAALKGSKQ IGFTIISLTF SLVAVLIPLL FMGDVVGRLF REFAITLAVS ILISAVVSLT
LTPMMCARLL RHVPESEMSR FHVVTGRFFD SVIEQYGRAL NWVLERQTAT LLVAVGTLVL
TGLLYVVVPK GFFPVQDTGM IQAITEAAQT SSFQSMGRKQ EAVQKVILED PAVDSVSSFI
GVDGTNTTIN AGRMIINLKP KDERDSMAVV TDRLQASVQK LGGVALYMQP VQDLTIEDRV
ARTQYQFTVE DPDPAVLAEW VPKLIERLKQ EPELRDVASD QQNNGLRAYV EIDRDAAARF
GITTAVIDSA LYSAFGQRLV STIFTQSSQY RVVLETMPQF RVSPESLSAL RLPSSSGGQV
PLGSIAHISE RTGPLVINHQ GQFPSATISF NLAPGESLGA AVDKITKVES EIGLPISMAT
EFQGAALAFR ASLSNTLWLI LAAVVTMYIV LGVLYESTIH PVTILSTLPS AAVGALLALL
VSGQDIGIIA IIGIILLIGI VKKNAIMMID FALEAEREGG MKPRDAIFQA CLLRFRPILM
TTMAALLAAL PMMLGTGIGS ELRRPLGITM VGGLLVSQVL TLFTTPVIYL AFDRVAIRLK
AWRRNRFGDP DEGGTGEDGG QQPHRPQEPN V
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