Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0483 |
Symbol | |
ID | 4037272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 511185 |
End bp | 512711 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637975858 |
Product | integrase catalytic subunit |
Protein accession | YP_582638 |
Protein GI | 94309428 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGACG TGGCCATACT GAGCATCATT CGACGCTGGC ATCTTCGCGA CCAGATCCCG CTGCGCGAGA TCGCCAGACG CCTGGGTATT TCCAGGAATA CGGTCAGGCG CTATCTGCGC ACTGACGTCA CAGCACCCGC CTACCCCACA CGGCAGAGCC CGAGCAAGCT CGACGGCCAT GCCGCCAAGC TCGCCGCGTG GCTCAAGACC GAGGCCAACA AGCCGCGTAA GCAACGACGC ACGCTCAAGC AGATCCATGC CGATCTGTGT GCTCTGGGCT TCACGGGTTC CTATGATCGA GTCGCGGCGT TCGCGCGTCG CTGGCGTCAG GAACAGCAAG AGCAAGCGCG ATCGTCGGGC CGCGGCACCT ACATCCCCTT GCGCTTCGCC GAGGGTGAGG CCTTCCAGTT CGACTGGAGC GAGGACTGGG CCGTCATCGC CGGCGAGCGC ACCAAGCTGC AGGTGGCCCA GTTCAAGCTG AGCCACAGTC GGGCCTTCTT CCTGCGCGCC TACCTGTTGC AGACCCACGA GATGCTGTTC GATGCCCATC ACCATGCCTT TGTGGCGTGG GGCGGGATCC CGCGCCGCGG CATCTACGAC AACATGAAGA CGGCCGTCGA CCGGGTGCGC CAGGGCAAGC TGCGCGACGT CAACCTGCGC TTTGGCACCA TGGTCAGCCA TTACCTGTTC GATGCCGAGT TCTGCAATCC AGCCTCGGGC TGGGAGAAGG GCCAGATCGA GAAGAATGTC CAGGACAGCC GTCACCGGAT CTGGCAACGT GTTCCTGCCT TCGGCTCTCT GGCCGCGCTT AATGATTGGT TGGCCGACCA ATGCGTGCGC CTGTGGCAGC AGACCCGCCA CCCGGAGCTG GATATGACCA TCTGGGAAGC CTGGTCACTG GAGCGGCCGC ACCTGATGCC GGTGGGGCAG GCGTTCGACG GCTTTGTCGA ACACACCAAG CGCGTGTCGC CTACCTGCCT GGTGAACTTC GAGCGCAACC GCTACAGCGT GCCTGCCTCG TTTGCCAACC GGCCCATCAG TCTGCGTGTC TATGCCACGC GGCTCTTGTT TGTCGCCGAA GGCCAGGTGA TTGCCGAGCA CGTACGGCAC ATCAATCGCG GTCACCATCC CGGCCATACG GTCTATGACT GGCGCCACTA CCTCGCGGTG CTGCAGCGCA AGCCTGGCGC GCTGCGCAAC GGCGCACCGT TCGCCGAGTT GCCAGAGGGC TTCCGGCGCC TGCAGGCTAC GCTGCTCAAG CGGCCCGGCG GCGATCGGGA GATGGTCGAG ATCTTGGCGC TTGTCCTATT GCACGACGAA CAGGCCGTGC TGACCGCGGT GGAGCTGGCG CTCGAGGCAG GTGCCGCCTC CAAGCAGACC GTCCTCAATA TCCTCAGCCG CCTGCTCGAA GGTGGACCGG TAGCCCCCAT CACCACGCCT CAGGCGCTGG CTTTGCAGGT CGAGCCGCAG GCCAACGTCG CGCGTTATGA CAGTCTGCGT GACCGGGAGG TGCCGCATGC AGCATGA
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Protein sequence | MIDVAILSII RRWHLRDQIP LREIARRLGI SRNTVRRYLR TDVTAPAYPT RQSPSKLDGH AAKLAAWLKT EANKPRKQRR TLKQIHADLC ALGFTGSYDR VAAFARRWRQ EQQEQARSSG RGTYIPLRFA EGEAFQFDWS EDWAVIAGER TKLQVAQFKL SHSRAFFLRA YLLQTHEMLF DAHHHAFVAW GGIPRRGIYD NMKTAVDRVR QGKLRDVNLR FGTMVSHYLF DAEFCNPASG WEKGQIEKNV QDSRHRIWQR VPAFGSLAAL NDWLADQCVR LWQQTRHPEL DMTIWEAWSL ERPHLMPVGQ AFDGFVEHTK RVSPTCLVNF ERNRYSVPAS FANRPISLRV YATRLLFVAE GQVIAEHVRH INRGHHPGHT VYDWRHYLAV LQRKPGALRN GAPFAELPEG FRRLQATLLK RPGGDREMVE ILALVLLHDE QAVLTAVELA LEAGAASKQT VLNILSRLLE GGPVAPITTP QALALQVEPQ ANVARYDSLR DREVPHAA
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