Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0474 |
Symbol | |
ID | 4037263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 503388 |
End bp | 505175 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637975849 |
Product | O-antigen polymerase |
Protein accession | YP_582629 |
Protein GI | 94309419 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCAC CTCGAGCTAC GCTTCCCGCG ACGGCGATCG TCGTCGCATT TACCTTGCCC CTGCTGGTTT CGAAGCACAC GCTGCCGCTT GCCACGTTCT ATGGCGAGTG GACGGCCGGA TTGCTTGGCG TATTCCTGAT CATCGCCCTG GCGCTGAGGC CAAGCCAGTC GGGCTCGAGA GCGTCCAGGT CGTTCCCGTG GATCATGCTG CTGCCGATCT GGTTGATTGT CACGACTGTC GCGCAAGCCG TCACGGGTAT GGTCGATGTC ACCGGCAGCC GTCAACTCAC GCAAATCGTG CTGGCGCTGG GCGCGGCGCT GATGTTGGCC GCATGGCGTG CCAGCCAGTC GATGTCGACC GACGAGCGCG CGAGTATTGT CGATTCGCTC GCGATCGCCT TCATGATTGC GGGGCTCCTC GGCACGCTGG CGCAATGGGT GCAAGTCTTC CATCTGGAAG ACCAAGCGTT CAACCTCGTA TCTGAATATT TCTACGACAA CAACCGCCGC CTCTGGGGCA ATCTGAACCA GCCGAATCAT CAGGCCACGA TTCAGGGCCT GGCACTGGTG GCTTCGGTGT GGCTCGCCAC GCGTGGGTGG CTGCGGTTTC CGGGCTGGCT CGTCGCGGTG CTGCTGCTGG AAAGCGGCAT CGTGTTGAGC GGGTCGCGCA CGGGCGTGCT GCATATCGGA TTGGCTGCGC TGTACGCGCT GATCGCCGCG CATCTGGCAC GGGGCACACC TCGCGGCACG GATCCGATGC ATCGCGCGCC GGGGCTGATT GTCGCGGCAG TGCTGATGGT CGTCGGCATC GTGGTGCTCC AGCCAGCCAT CAAGCACGCT GGTCAGTTGT TCGACTGGCG GCTGTTCGAC ACCGTCGCGC AACTCCAGTC CGGTGATCAG GTTTCCGCCC GCGGCGCCTT GTGGGCACAT GCCTGGGCGA TGTTCCGCGC GCATCCACTG CTTGGGGTTG GCTATGGCGA GTTCGGCTGG GCCCAGTTCC AGCAGATGGC CGAGGTTGGC AAAACGGCCG AGATGTCGCT GCATGCGCAT AACGCAGTAC TCGATCTGCT GGCCAAGACG GGTCTGGTCG GTACGATCGG CGTGGCGCTG GTACTGGTAG GGTGGCTCTG GCGCGTGGTG CGCGATCGGA TCTGGGCAGC TTCGTCGAGC GAGCGCGCCA TGGCCGTGCC GATGCTGTTC TGGCTGGCGA TGTATGGGGC GCACTCGATG CTCGAGTATC CGCTGCACTA CCTGTACTTC TTCCTGCCGT TCTGTTTCCT GCTGGCGTGG CTGGAGCCGT CCGGCTTTGG CAAGCGCTTG CCGCGTGCCG TTCCGGCGAT AGCGTGTGTG TTGTTCATCG TTGTGTCCGC CTTCTTGCTT GTGACGCTCT GGCAGGACTA CAAGCGTGTC GAGGCACGCG AGTATGCGCA TGAAGATAAG CGGGATAGCC TGCCGATGCC CAGGCTCTGG TTCCGCCAGC ACGCGGCATC GGACACCGTC GAGCACGCCA GGATCACGCC GGACAATGCT GCCAGCTTGC TGCCGGCGCA TATGGCCGCA TTGCATCTGC TGCCAACGCC GAACCTCATC GGGCGCACCG CCTGGTTGCT CGCGTTGACC GGTGATCAGG CGAAAGCACG CCAGTGGGTG GAGCGCTTGC CGTACTACTT TCAGGGCGAC GAGGCGACGA TCTTAGAGAT GCTCTCACGC GACTGCGACG CGTTAGGCGC CGACCGCAGG CCCCGCGAGT TCTGCGCCTG GGCGCGCCTG CGCGCCCGGC GCGGTTGA
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Protein sequence | MPAPRATLPA TAIVVAFTLP LLVSKHTLPL ATFYGEWTAG LLGVFLIIAL ALRPSQSGSR ASRSFPWIML LPIWLIVTTV AQAVTGMVDV TGSRQLTQIV LALGAALMLA AWRASQSMST DERASIVDSL AIAFMIAGLL GTLAQWVQVF HLEDQAFNLV SEYFYDNNRR LWGNLNQPNH QATIQGLALV ASVWLATRGW LRFPGWLVAV LLLESGIVLS GSRTGVLHIG LAALYALIAA HLARGTPRGT DPMHRAPGLI VAAVLMVVGI VVLQPAIKHA GQLFDWRLFD TVAQLQSGDQ VSARGALWAH AWAMFRAHPL LGVGYGEFGW AQFQQMAEVG KTAEMSLHAH NAVLDLLAKT GLVGTIGVAL VLVGWLWRVV RDRIWAASSS ERAMAVPMLF WLAMYGAHSM LEYPLHYLYF FLPFCFLLAW LEPSGFGKRL PRAVPAIACV LFIVVSAFLL VTLWQDYKRV EAREYAHEDK RDSLPMPRLW FRQHAASDTV EHARITPDNA ASLLPAHMAA LHLLPTPNLI GRTAWLLALT GDQAKARQWV ERLPYYFQGD EATILEMLSR DCDALGADRR PREFCAWARL RARRG
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