| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0438 |
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| Symbol | pdxA |
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| ID | 4037226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 464753 |
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| End bp | 465829 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637975812 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_582593 |
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| Protein GI | 94309383 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.137015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.840878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACC CCGCGCCACT CGACCTAGCG ATCACGACCG GAGAACCGGC CGGCATCGGT
CCCGATATCA CGATCGGTGC CCTGCTGCAG TTCGCCGCCA ATCACGGCGG CAACGTCGGC
CATGGGGGGG CGGTCCGCTT CCATGTGATC GGCGATGCGC GTCTGCTCGA TCAGCGTGCC
GAGGCGCTCG GCGTGGCCCA TGCGTGGGCA CGTCGGATTG CCGACGGCGA CGTGATCGTA
GAAGACATCG CGCTGGGCGT GCACTGCGAA CCGGGGCGGC TCGATGCCCG CAATGGCCAC
TACGTGCTGG CGCTGCTGGA TGCCGCCGTC GATGGCCTGC GGACGGGCCG CTATGCGGCC
ATGATTACCG CGCCGGTGCA GAAGAGCACG ATCAATGATG CTGGCGTGCC GTTTTCCGGG
CATACCGAAT ATTTGGCCGA ATGCGCCGGC GTGCCGCGTG TGGTAATGAT GCTGGCCGGC
CCGCAGCCGG CGCATGACAA CGCCATGCTG CGCGTGGCGC TGGCCACCAC GCATCTGCCG
CTGCGCGCGG TGCCCGACGC GCTGAACATT CCGATGTTGG TCGAGACGCT GGCGATTGTC
GATGCCGACC TGCGCCGGAA TTTCGGCATC GCGCGTCCAC GCATCCTGGT AACGGGACTG
AACCCGCACG CGGGGGAGTC CGGTCATATG GGGCGCGAGG AAATCGACGT GATTTCTCCC
GCGCTCGAGC AGGCGCGCGA TGCCGATATC GACGCGCGCG GCCCGTATCC CGCCGACACG
CTGTTCCAGC CGCGCCATCT GCGTGATGCC GACTGCGTGC TGGCGATGTA CCATGACCAG
GGCCTGGCAC CCCTCAAGTA CGGCACCTTT GGACACGGCG TGAATATCAC GCTGGGGCTA
CCCTTCATCC GCACATCGGT GGACCATGGG ACCGCGCTCG ACCTGGCCGG CACTGGCCGC
GCCGAGCACG GCAGCATGAT CGAAGCCATC CGCTGTGCCA TTACCATGGC CGGACATGCC
AGCGGGCGCC ACAGCAATGG GCGCGCCGAT AACGGCATCT CCAACGGCCA GCACTGA
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| Protein sequence | MPDPAPLDLA ITTGEPAGIG PDITIGALLQ FAANHGGNVG HGGAVRFHVI GDARLLDQRA
EALGVAHAWA RRIADGDVIV EDIALGVHCE PGRLDARNGH YVLALLDAAV DGLRTGRYAA
MITAPVQKST INDAGVPFSG HTEYLAECAG VPRVVMMLAG PQPAHDNAML RVALATTHLP
LRAVPDALNI PMLVETLAIV DADLRRNFGI ARPRILVTGL NPHAGESGHM GREEIDVISP
ALEQARDADI DARGPYPADT LFQPRHLRDA DCVLAMYHDQ GLAPLKYGTF GHGVNITLGL
PFIRTSVDHG TALDLAGTGR AEHGSMIEAI RCAITMAGHA SGRHSNGRAD NGISNGQH
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