| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0430 |
|---|
| Symbol | |
|---|
| ID | 4037218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 454491 |
|---|
| End bp | 455744 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637975804 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_582585 |
|---|
| Protein GI | 94309375 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01984] 2-polyprenyl-6-methoxyphenol 4-hydroxylase
[TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.528164 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0954743 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGC CAGCCAGCAC TGACGCGCTC GCGGTTGAGC CGCGCGACAT CGCCATTGTC
GGCGGCGGGC CGGTCGGCCT GGCGCTGGCG GCGCAGTTGC TACGCACCAC CTCGTGGCGC
ATCACGCTGA TCGACGCGGC CACGCCGGCG CGCGCCGCGC GTGACCCGCG CGCCATTGCC
CTGTCGCACG GCAGCCGCCA GTTGCTCGAG CAGATCGGCG CATGGCCGGT GCCGGCGCAG
GCGATCGAGC ATATCCATGT ATCGCAGCGC GGCCGCTTCG GCCATGTGAA GCTCCATGGC
GATGACTATG GCGTGCCCGC GCTGGGCTAT GTGGTCAGGT ATGGCGACCT TTGCCAGACC
CTCGAACGCG CGCTCGCCCG CGCCGCCGAC GCCGCCCCGG GCCGGCTTGA ACGCGCCTTC
GAGACGCGTA TCGACAACAT CGACCAGGGC GACCGGAGCG ACCGGAGCGA CGCCGCCCTG
GTCCGGCTGA CCGGCACCTC GCACGCAGAG CACGAGGGAT TACCGGTTGC GTTTGCGGCC
CGCATCGCTG TGCAGGCCGA AGGCGGCCTG TTCCACCAGC AAATCCAGCG CCTGTCGCAT
GGCACCGAGG CCGTGCGGCG GCGCGACTAT CAACAGACCG CGATCATCGG CCATGTGACG
TGCACGCAAC CGCAGCCCGG CTGGGCGTGG GAACGCTTTA CCGAGGAAGG GCCGCTGGCG
CTGCTGCCAC ATGAGGAACA TGGCGTGCAG GGCTACGCGC TGGTCTGGTG CTGCCCGCCC
GAGCAGGCCA TGCGCCGGCT CGCGCTCACC GAGGACGAGT TCGCATATGA ACTGGGCCAG
GCGTTCGGTA CGCGAATGGG GCAGTTCACG CTGGTTGGCA AGCGCCACGC ATTCCCGCTC
GGGCTCAATG CCGCGCCGGT CACGGTCGAC GGGCGCGTTG CCGCGGTCGG CAATGCCGCG
CAGACGCTAC ATCCGGTAGC CGGACAGGGG CTGAACCTGG GCCTTCGCGA CGCGTTCGCG
CTGGCCGATT CGCTGCGCGC AGGCTGCACA CCACAAGCGC TGGAGGCGTT CGCGAGCCGG
CACCGGGTCG ACCGCGCGAT GACAATCGGC ATCACCGACC TGCTGCCGCG TGTGTTCGCC
GTGGGCGGCC CGATGGCGGC CCACGCACGC GGCGCGTCGC TCGCAGCACT GGCCTGCGTG
GCGCCGCTCA AGCACGCGCT GGCGCGGCAA ATGATGTACG GCGCACGCGG CTAG
|
|---|
| Protein sequence | MTLPASTDAL AVEPRDIAIV GGGPVGLALA AQLLRTTSWR ITLIDAATPA RAARDPRAIA
LSHGSRQLLE QIGAWPVPAQ AIEHIHVSQR GRFGHVKLHG DDYGVPALGY VVRYGDLCQT
LERALARAAD AAPGRLERAF ETRIDNIDQG DRSDRSDAAL VRLTGTSHAE HEGLPVAFAA
RIAVQAEGGL FHQQIQRLSH GTEAVRRRDY QQTAIIGHVT CTQPQPGWAW ERFTEEGPLA
LLPHEEHGVQ GYALVWCCPP EQAMRRLALT EDEFAYELGQ AFGTRMGQFT LVGKRHAFPL
GLNAAPVTVD GRVAAVGNAA QTLHPVAGQG LNLGLRDAFA LADSLRAGCT PQALEAFASR
HRVDRAMTIG ITDLLPRVFA VGGPMAAHAR GASLAALACV APLKHALARQ MMYGARG
|
|---|
| |