Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0385 |
Symbol | |
ID | 4037172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 410451 |
End bp | 412238 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637975759 |
Product | acyl-CoA dehydrogenase-like protein |
Protein accession | YP_582540 |
Protein GI | 94309330 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.13259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCAGT ACACCGCACC GTTGCGCGAC ATGCAGTTCG TGCTCCATGA ACTGCTCGGC GCCGAAGCCG AACTCAAGGC GATGCCGCAG CACGCGGACA TCGACGTGGA CACCATCAAC CAGGTGCTTG AGGAAGCCGG CAAGTTCTGC TCCGACGTGG TCTTCCCGCT GAACCAGCCT GGTGACCGTG AAGGCTGCAC CTACGTCGGC GACGGCGTGG TGCGCGCGCC CAAGGGCTTC AAGGAGGCCT ATCAGCAGTT CGTGGAAGCC GGCTGGCCCG CACTGGCGTG CGATCCGGAG TTTGGCGGCC AGGGTTTGCC GATCATGATC AACAACGCGC TGTACGAGAT GCTGAACTCG GCCGGCCAGG CATGGACGAT GTATCCGGGC CTGTCGCACG GTGCCTATGA AGCGCTGCAC GCGCACGGCA CGCCGGAACT GAAGCAGACG TATCTGCCGA AGCTGGTGTC GGGTGTCTGG ACGGGCACGA TGTGCCTGAC CGAGCCGCAC TGCGGCACCG ATCTCGGCAT CCTGCGCAGC AAGGCCGAAC CGCAGGCCGA TGGCTCGTAC TCGATCACCG GCACCAAGAT CTTTATCTCG GCCGGCGAGC ATGACATGGC CGAGAACATC ATCCACCTCG TGCTGGCACG CCTGCCGGAC GCACCTGGCG GTACCAAGGG CATTTCGCTG TTCGTCGTGC CGAAGTTCAT CCCCGACGCC AACGGCAACC CGGGCGAGCG CAACGGCATC AAGTGCGGCT CGATCGAACA CAAGATGGGC ATTCACGGCA ACGCCACCTG CGTGATGAAC CTCGACGGCG CGCGCGGCTG GATGGTGGGC GAGCCCAACA AGGGCCTGAA CGCGATGTTC GTGATGATGA ACGCCGCGCG CCTCGGCGTT GGCGCCCAGG GTCTGGGCTT GACCGAGGTG GCCTATCAGA ACTCGCTGGC CTACGCGAAG GACCGTCTGC AGATGCGCTC GCTGACTGGC CCGAAGGCAC CGGACAAGCC CGCCGACCCG ATCATCGTGC ACCCGGACGT GCGTCGCATG TTGCTGACGC AAAAGGCCTA CGCCGAAGGT GGCCGCGCGT TCGCCTACTG GACCGCGCTG CAGATCGACC GTGAACTGTC GCACCCCGAC GAAAGCGTGC GCAAGGAAGC CGGCGACCTC GTGGCGCTGC TGACCCCGGT CATCAAGGCC TTCCTGACCG ACAACGCCTT CACCTCGACC AACGAGGGCA TGCAGGTGTT CGGCGGCCAC GGCTACATCT CCGAGTGGGG CATGGAGCAA TACGTGCGCG ACGCGCGTAT CAACATGATC TACGAAGGCA CCAACACGGT TCAGTCGCTG GACCTGCTGG GCCGCAAGGT GCTGGGCGAC ATGGGCGCCA AGCTGAAGGC CTTCGGCAAG ATCGTGCAGA CGTTTGTCGA GGAAGAAGGC ACGAGCGAGG CGATGCAGGA GTTCGTCAAC CCGCTGGCCG ACATCGGCGA CAAGGTGCAG AAGCTGACGA TGGAGATCGG CATGAAGGCG ATGGGCAATG CCGACGAAGT GGGTGCTGCC GCCGTGCCGT ACTTGCGCGT GGTGGGACAC CTCGTGTTCT CGTACTTCTG GGCCCGCATG GCCAAGATCG CCCTGGACAA GCAGGATAGC GGCGACAAGT TCTACACGAC CAAGCTGGCC ACGGCGCGCT TCTACTTCGC CAAGCTGCTG CCGGAAACCG CGGGCGAGAT TCGCAAGGCT CGCGCTGGCG CATCCACGCT GATGGCGCTG GACGCAGATC TGTTCTGA
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Protein sequence | MGQYTAPLRD MQFVLHELLG AEAELKAMPQ HADIDVDTIN QVLEEAGKFC SDVVFPLNQP GDREGCTYVG DGVVRAPKGF KEAYQQFVEA GWPALACDPE FGGQGLPIMI NNALYEMLNS AGQAWTMYPG LSHGAYEALH AHGTPELKQT YLPKLVSGVW TGTMCLTEPH CGTDLGILRS KAEPQADGSY SITGTKIFIS AGEHDMAENI IHLVLARLPD APGGTKGISL FVVPKFIPDA NGNPGERNGI KCGSIEHKMG IHGNATCVMN LDGARGWMVG EPNKGLNAMF VMMNAARLGV GAQGLGLTEV AYQNSLAYAK DRLQMRSLTG PKAPDKPADP IIVHPDVRRM LLTQKAYAEG GRAFAYWTAL QIDRELSHPD ESVRKEAGDL VALLTPVIKA FLTDNAFTST NEGMQVFGGH GYISEWGMEQ YVRDARINMI YEGTNTVQSL DLLGRKVLGD MGAKLKAFGK IVQTFVEEEG TSEAMQEFVN PLADIGDKVQ KLTMEIGMKA MGNADEVGAA AVPYLRVVGH LVFSYFWARM AKIALDKQDS GDKFYTTKLA TARFYFAKLL PETAGEIRKA RAGASTLMAL DADLF
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