Gene Rmet_0372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0372 
Symbol 
ID4037159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp396681 
End bp397670 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content67% 
IMG OID637975746 
Productimport inner membrane translocase, subunit Tim44 
Protein accessionYP_582527 
Protein GI94309317 
COG category[S] Function unknown 
COG ID[COG4395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.18784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.460564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCTT TTCGCGGAAA ATTCCTGGCC ATGTCGCTCA TCGCGACACT GGCTCTCGGG 
GCAGCGCTCG ACGCCAATGC CAAGCGTCTG GGCGGATCGC GCAGTATCGG CAAGCAGTCG
TCGGGCGTGA CGCAGCAGCG CCAGCAGGCG CCGGCGCAGC AAAACACGCC GCCGGCCCAG
CAACCGGCGC AGGCGGCACC GGCTACGGCG GGTGCGGCAG GTGCGGCAGG TGGCGCGGCC
GCCGCGGCAG CGCCCAAGCG TAACTGGGGT GGGATGCTGG GTGGTCTGGC AGCCGGCCTC
GGCATCGGCT ACCTGCTTTC GCACTTCGGC CTGGGCGGCG CGGCCGCCAG CATCCTGTCC
AACGTGATCC TGTTCGGCGT GATTGCGCTG ATCGCAATGT GGCTGATCCG CAAGTTCCGC
GGTGGCTCGG CTCGCACGCA GCAGCCTTCG TACGCCGGCA TGGGCGGCAA TGGGTCGAAT
TACGGTGGTC CGTCGCATGC CGAACCGACG CTGCGCACGG CCGAGCCTGT TGGCAATGGC
GGCGCCGCCA GCAATCCGGT CATGGGTGGC GCGGCAGCAG CCGCAACCGC GGCGGCTGTC
CAGCAGCCGT GGGGCGTGCC GGCGGATTTC GACACCGAGT CCTTCCTGCG TAACGCCAAG
GTTCACTATG TGCGTCTGCA GGCTGCTTGG GATGCGGGCA ATCAGGACGA CATCCGCGAA
TTCACCACGC CGGAAATGTT TGCCGAGATC AAGATGGACC TGTCCGAGCG CGGCAGCGAG
GTCAACAAGA CCGACGTCGT GACGCTGGAC GCCCAGTTGC TCGGTATCGA GTCGACCCCG
GCCCAGCACA TCGCCAGCGT GCGTTTCTCG GGCATGATCC GCGAGAAGGC AGGCGAACCG
GCTCAGCCGT TCGGTGAGGT CTGGAACCTG GCAAAGGCGA CGTCGGGCAA CGGTGGCTGG
CTGCTCGCCG GCATCCAGCA GGAATCCTGA
 
Protein sequence
MSSFRGKFLA MSLIATLALG AALDANAKRL GGSRSIGKQS SGVTQQRQQA PAQQNTPPAQ 
QPAQAAPATA GAAGAAGGAA AAAAPKRNWG GMLGGLAAGL GIGYLLSHFG LGGAAASILS
NVILFGVIAL IAMWLIRKFR GGSARTQQPS YAGMGGNGSN YGGPSHAEPT LRTAEPVGNG
GAASNPVMGG AAAAATAAAV QQPWGVPADF DTESFLRNAK VHYVRLQAAW DAGNQDDIRE
FTTPEMFAEI KMDLSERGSE VNKTDVVTLD AQLLGIESTP AQHIASVRFS GMIREKAGEP
AQPFGEVWNL AKATSGNGGW LLAGIQQES