Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0294 |
Symbol | |
ID | 4037081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 310668 |
End bp | 312686 |
Gene Length | 2019 bp |
Protein Length | 672 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637975668 |
Product | hypothetical protein |
Protein accession | YP_582449 |
Protein GI | 94309239 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGAACCAT CCCGGGGCCA GTTGTGCAAT ACGAGCCCGA AACCAATAAA TCCGAGCCGA AAAGCGAACC ACTCCATGAC GAGCCTCGCA CAGCAATTCG AACAATATGG CGCCTGGAGA ACCGGGGTTC TTCATTCTCT CGCCGACTTC CAGTCCTGGC TGCAGCAATA CGATCTTTAT GACGCCACCG CGGAAGACCG CGTGCAGCGC ATCCAGAACG TGCTCAGGAG CGACCGGCTC AAGGTCGCGT TCATCGCCGA GTTCTCGCGC GGCAAGAGCG AACTGATCAA CGCCATCTTC TTTGCCGACT ACGGTCGGCG CATCTTGCCG TCGTCGGCGG GCCGCACCAC GATGTGCCCG ACGGAGTTGC GCTACGACGA GAACGAGGCG CCGTGCATCC GGCTGCTGCC GATCGAGACG CGCTTGCAGG ATGCGTCCAC GGCGGACTTC ATGGAGCCCG GTTCGGCGAA TTCTCACTGG ACTACGGTAC CGCTCGACCC GTCGTCACCC GAGGGCATGC TGGCCGCGTT CCAGCACGTG GTGGAGACCA CGCGCGTGAG CCCGGCCGAG GCCGAGGCGC TGGGCCTGTA CAACGAGAAC GATCCGGATG CCGCCTGGGC AGTGGACGCC GATGGCATGG TGGAGATCTC GCGCTGGCGC CATGCGGTGA TCAACTTCCC GCATCCGCTG CTGCGCCAGG GTCTGGTGAT CCTGGACACG CCGGGCCTGA ACGCGATCGG TACCGAACCT GAACTGACGC TGCGCCTGAT TCCCGATGCG CACGTGGTGG TATTCGTGCT GGCCGCCGAT GCCGGCGTGA CCAAGAGCGA CCTCGATCTC TGGCGCAGCC ATGTGGGCGC CGGCCATCGC CGCGGCTGCC TGGCCGTGCT GAACAAGATC GATGGTCTCT GGGACCCGCT CAAGTCATCA TCCGAGATTG CGTCGGAGAT TTCGCGCCAG GTCCGTACGA CCGCGCAGAC GCTCGGCATC GAGGAACGCC GGGTCTACCC GGTATCGGCA CAGAAGGGCT TGGTGGCCAA GGTCACCAAC GACGAGCCGA TGCTCGTGCG CAGCAACCTG ATGCAGTTCG AGCACGTGCT GTCGGACCAG CTCATTCCGC AGCGACGCGA GATCGTGGCC GACCAGGTAC AGCGCTTGGT GCAGGAGATG TCGCGCGGCG CCCAGCAACT GCTGCAGAGC CGCCGGCGCG ATATCGTCGA GCAGTTGTTC GAGTTACGCG GCCTGCGTGG CAAGAATCAT GCGATGGTCA AGCACATGCT GATGCGCGTG CAGAGCGAGA AGGAGGAGTT CGAGCAGAGC ATCGCGAAGT TCCAGGCGCT GCGGCTGGTC TTCGGGCGGC ATAGCGCGGA CATCATCAAG AGCCTGCAAC TGCGCGACGT GCGCCGCACG ATGCGCGATG CGCGCGAGCA AATGAAGGAG CGCTTCTTCT CGCGCGGCCT GCGCGAGGAT ATGGAAGCGC TGTTCGGCCA GCTTACCGGG TTGATTACCG ACGCCGATCA GAAGATCGTC GGCTTGCACC AGCTCGTGGA AAGCATGTAT CGGCGCTTCA ATGCCGAACA TGGTTTCACG CTGCCTTCGC CGATGCAGTT CGTGACGTCG CGCTATACCA ACGAACTGCA GGAAACGCTG CAATTGGTGA ACACGCATTT CGGCGCCGTG CACATGCTGA CGCGCTCGCG TCCGCAACTG GTGCAGAACG CGTTCGCGAC GATGGCCAGC CGCGTGCTCG AGAACTTCCG CGATCTGAAT CGCGATATCG AGATCTGGCT GAAGTCGGTG ATGACGCCGC TCGAGGCGCA GGTACGCGAG CACCAGAAGC AATTGCGCCG ACGCGTCGAT TCGATCGAGC GTATCCACGA GGCCACGGAC ACGCTGGAAT CGCGCATTGC CGAACTTGAG GAAGTGCTGA ACGGGCTCGA TGAGCGGAGC ACCAAGATCG AGAGCTTTGC GCGCAGGCTG GTGGACGCGC CCCCGGAAGC AACGGCGCGC GCGGCGTAG
|
Protein sequence | MEPSRGQLCN TSPKPINPSR KANHSMTSLA QQFEQYGAWR TGVLHSLADF QSWLQQYDLY DATAEDRVQR IQNVLRSDRL KVAFIAEFSR GKSELINAIF FADYGRRILP SSAGRTTMCP TELRYDENEA PCIRLLPIET RLQDASTADF MEPGSANSHW TTVPLDPSSP EGMLAAFQHV VETTRVSPAE AEALGLYNEN DPDAAWAVDA DGMVEISRWR HAVINFPHPL LRQGLVILDT PGLNAIGTEP ELTLRLIPDA HVVVFVLAAD AGVTKSDLDL WRSHVGAGHR RGCLAVLNKI DGLWDPLKSS SEIASEISRQ VRTTAQTLGI EERRVYPVSA QKGLVAKVTN DEPMLVRSNL MQFEHVLSDQ LIPQRREIVA DQVQRLVQEM SRGAQQLLQS RRRDIVEQLF ELRGLRGKNH AMVKHMLMRV QSEKEEFEQS IAKFQALRLV FGRHSADIIK SLQLRDVRRT MRDAREQMKE RFFSRGLRED MEALFGQLTG LITDADQKIV GLHQLVESMY RRFNAEHGFT LPSPMQFVTS RYTNELQETL QLVNTHFGAV HMLTRSRPQL VQNAFATMAS RVLENFRDLN RDIEIWLKSV MTPLEAQVRE HQKQLRRRVD SIERIHEATD TLESRIAELE EVLNGLDERS TKIESFARRL VDAPPEATAR AA
|
| |