| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0218 |
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| Symbol | |
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| ID | 4037004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 231824 |
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| End bp | 233161 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637975591 |
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| Product | putative branched-chain amino acid transport system substrate-binding protein |
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| Protein accession | YP_582373 |
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| Protein GI | 94309163 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCG TGTTTCGCAA CGTGCAGCGC GCCGCCCTTG TGGTCAGCGT CGCGGCTGCC
ATGCTGGTAC CGGCATTGCC GGCGCTGGCG CAAACCAATG ATCAGTTCGT CGCGCTGCCG
AGCTACCGTG TTGGCCCGTA CGGCGCCAAC GGCCAGTCGT TCTATGGCGG CTTCGTGGAC
TACCTGAACT ACGTCAATCT CAAGGAAGGT GGCGTCAACG GCGTCAAGCT GGGCTGGGAA
GAGTGCGAGA CCGAGTACAA CAACGCCAAG GGCGTGGAGT GCTACGAGCG CTTGAAGGCC
AAGAGCAGCG CGAGCAAGGG CACCGCCTAT CACACAATGT CCACGGGTAT CTCGTACGCG
CTGGTCGACA AGACCGCCGC CGACAAGGTG CCGCTGGTGA TGATGGGCTA CGGACGTACC
GATGCAGTGG ATGGCTCGGT CTTCCCGTAC GCGTTTCCGC TGGTGACGAC GTACCAGATG
CAGGTATCGG CCATCGTCAA GTTCCTGGCG TCGAAGAACG GCGGATCGCT GGCCGGCAAG
AAGATCGTCT ACCTGTATCA CGATTCGGCC TACGGCAAGG AGCCGATCGT CGCGCTCGAG
GCCGAAGCCA AACTCGGCAA GTTCAACCTG GTCGAGATTC CCGTGGCGCA CCCGGGCAAC
GAGCAGGGTG CGCAGTGGCT CAAGATCCGC CAGGAGAATC CTGACTACGT GATCTTCTGG
GGCTGGGGCG TGATGAACCA GACCGCGCTG AAGGCTGCGC AGAAGGTCGG CTACTCGCGC
GACAAGATGA TCGGGTCGTG GTGGGCCGGG TCCGAGGAGG ACACGGTACC GGCCGGCGAG
GCCGCCAAGG GCTACATGAG CGCCACCTGG AACGTGGCTG GCAAGAACGT GCCGCTGATT
GCTGACATCG AGAAGGTGGT CTACGGCGCC GGCAAGGGCA ACATGCAGGA TCGCAACAAG
GTCGGCTCGG TGCTCTATAA CCGCGGCGTG TCGGCGGCCG TGGTGACCGT CGAAGCCATC
CGCGGGGCGC AGGCGAAGTT CGGCAAGGGC AAGGTGATGA GCGGCGACGA AATGCGCTGG
GCCTTCGAGA ACCTGAACCT GACCAGCGCG CGGTTGCAGC AGGTTGGCGC CACCGGCCTG
CTGCCGGAGA TCAAGACGAG CTGCGACAAC CACGAGGGCT CCGGCAAGGT GAAGATCCAG
CAGTGGGACG GCGCCAAGTG GGTGGTGGTG TCCGACTGGA TCGAGGGTAA CAAGAGCCTG
ATCCACCCGC TGTTCAAGGC CACGGCGGCG CAGTACGCGA AGGAAAAGGG CATCACGCCG
GCTTGCATGA AGTCGTAG
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| Protein sequence | MTTVFRNVQR AALVVSVAAA MLVPALPALA QTNDQFVALP SYRVGPYGAN GQSFYGGFVD
YLNYVNLKEG GVNGVKLGWE ECETEYNNAK GVECYERLKA KSSASKGTAY HTMSTGISYA
LVDKTAADKV PLVMMGYGRT DAVDGSVFPY AFPLVTTYQM QVSAIVKFLA SKNGGSLAGK
KIVYLYHDSA YGKEPIVALE AEAKLGKFNL VEIPVAHPGN EQGAQWLKIR QENPDYVIFW
GWGVMNQTAL KAAQKVGYSR DKMIGSWWAG SEEDTVPAGE AAKGYMSATW NVAGKNVPLI
ADIEKVVYGA GKGNMQDRNK VGSVLYNRGV SAAVVTVEAI RGAQAKFGKG KVMSGDEMRW
AFENLNLTSA RLQQVGATGL LPEIKTSCDN HEGSGKVKIQ QWDGAKWVVV SDWIEGNKSL
IHPLFKATAA QYAKEKGITP ACMKS
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