| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0153 |
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| Symbol | dapF |
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| ID | 4036937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 157559 |
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| End bp | 158425 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637975525 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_582308 |
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| Protein GI | 94309098 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCC AGTTCACCAA GATGCACGGC GCCGGCAACG ATTTCATCGT GCTGGACGGC
ATTCACCAGA AGCTCGACCT GACCGACGCG CAATGGCGCG CGCTGGCGAA TCGCCATTTC
GGCATCGGCG CCGACCAGAT CCTGATCGTT GAAAAATCCT CGCGCGACGA TGTGGATTTC
CGCTACCGGA TCGTCAACGC GGACGGCGGC GAAGTCGAAC ACTGCGGCAA CGGCGCCCGT
TGCTTCGTCC GCTTCGTCAC GGATCGTGGC ATGACCGACA AGCAGTCGGT CCGCGTGGAA
GTCATGAACG GCGTCATCAC GCTGAAGCTG CAGGACGACG GTCAGGTGAC CGTGGACATG
GGTGAGCCCG AACTCACGCC CGCCCGCGTG CCATTCATCG CCGACGGCCT GCCGACGCGC
GCCGAAGCCC AGGACACGCT CTATGGTCTC GAAGTCAACG GCCGCACCGA GTGGATCTCG
CCCGTGTCGA TGGGCAATCC GCACGCGGTG CAGATCGTGG ACGACGTAGA GCAATTCCCG
GTGCTTCAGG ACGGCCCGGT CATCGAGCAC CACAAGTCGT TCCCGAACCG GGTCAATGCC
GGATTCATGC AGATCGTCGA CCGCAATACG GTGCGGCTGC GCGTGTTCGA ACGCGGCGCG
GGCGAAACGC TGGCGTGCGG CACGGGCGCC TGCGCGGCCG TGGTGGCTGG CATCCGCCGC
GGCTTGCTGG ACTCTCCGGT CAAGGTGCAC ACCCACGGCG GCGACCTGAC CATCGCGTGG
CAAGGCGCTG GCCAGCCCGT GCAGATGACG GGCCCCGCGA CGACCGTGTT CGAAGGCACT
ATTGACCTCT CCACGCTGCC TGCCTGA
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| Protein sequence | MKLQFTKMHG AGNDFIVLDG IHQKLDLTDA QWRALANRHF GIGADQILIV EKSSRDDVDF
RYRIVNADGG EVEHCGNGAR CFVRFVTDRG MTDKQSVRVE VMNGVITLKL QDDGQVTVDM
GEPELTPARV PFIADGLPTR AEAQDTLYGL EVNGRTEWIS PVSMGNPHAV QIVDDVEQFP
VLQDGPVIEH HKSFPNRVNA GFMQIVDRNT VRLRVFERGA GETLACGTGA CAAVVAGIRR
GLLDSPVKVH THGGDLTIAW QGAGQPVQMT GPATTVFEGT IDLSTLPA
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