| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0141 |
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| Symbol | |
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| ID | 4036925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 145594 |
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| End bp | 146598 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637975513 |
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| Product | pyrimidine 5-nucleotidase |
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| Protein accession | YP_582296 |
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| Protein GI | 94309086 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0804995 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCATTC GTCAGCCCAC CCAGCGTCGC GGCGTAGAAC GCGCTCGCCT GCATTCCTCC
CACCGGCCGC GGCGCCATCT GGTCCGCGGC GTGGCCGGCA ACACGTCTGG CGACACCGTC
TGGCTGTTCG ATCTCGACAA CACGCTGCAC GATGCCTCGC ACGCCATCTT TCCGGCGATC
AACCGACTGA TGACGGCCTA CGTGGCGCGT GTGCTCGGCT GCGACGACGC TACGGCCAGC
CGGGTGCGCG TCGACTACTG GCAGCGCTAC GGCGCCACGC TGCTCGGCAT GGTCCGCCAC
CATCAGGTCG ATCCGGCGGA CTTCCTGCGC GCCGCGCATG ATTTCCCCGA GCTGGCGGAC
ATGGTGCGCG TGCGACGAGG TCTGGTGGCC GCACTGCGCC AGTTGCCGGG GCGGAAGATC
CTGGTCACGA ACGCACCGCG CAACTACGCG CGCAGCGTGA TGGCGATCGC TGGCATCGAT
CGATGTTTCG AGCGGGTCGT GGCCATCGAG GACATGTGGG TGCACGGACA CCTGCGTCCG
AAACCGGACC GCCGCATGAT GCTGCGATTG CTGGCGCAGA TCGGCGTGGC GCCGCACCGG
GCGGTACTGG TGGAAGACAC GCTGTCGCAC CTCAAGCACT ATGCGGGGTC GGGTATCCGC
AGGGCCTGGG TGACCGGCTA CCTGCGCACG ATCGCGCCGT CACGGCCGCA CGTGGTGGTG
CCGGCTCAGG ACGCCAGCGT GCCCGGCGCG GCGCGTGACG CGGTCACTCG CTCGACGCTG
GCTGCCGAAG ACCGCCAGCG CGTGGCGCAT CTGGCGCAGG AACGGTCGGT GACGCTGGTG
GCGGCCGAGA GCCAGGACCC CACCCGTGCG GCAACCACGC CACAGTCGCA GCCCGATCAT
TTGCCGCGTA TGCGGGCACG CGTGACGAAT CGGCCCGGCT ATGTGGACAT AAAAGTACAA
TCGATGCATC AACTCCTACG ACGAATGTGG AGAACCGGGT CATGA
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| Protein sequence | MFIRQPTQRR GVERARLHSS HRPRRHLVRG VAGNTSGDTV WLFDLDNTLH DASHAIFPAI
NRLMTAYVAR VLGCDDATAS RVRVDYWQRY GATLLGMVRH HQVDPADFLR AAHDFPELAD
MVRVRRGLVA ALRQLPGRKI LVTNAPRNYA RSVMAIAGID RCFERVVAIE DMWVHGHLRP
KPDRRMMLRL LAQIGVAPHR AVLVEDTLSH LKHYAGSGIR RAWVTGYLRT IAPSRPHVVV
PAQDASVPGA ARDAVTRSTL AAEDRQRVAH LAQERSVTLV AAESQDPTRA ATTPQSQPDH
LPRMRARVTN RPGYVDIKVQ SMHQLLRRMW RTGS
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