Gene Rmet_0130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0130 
Symbol 
ID4036914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp136126 
End bp137112 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content65% 
IMG OID637975502 
Producthypothetical protein 
Protein accessionYP_582285 
Protein GI94309075 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.090251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAG TTGCATTGAA ATTCGCGGCC GTGCTGGCTG TTGCTGGCGT GGGCGTTTTC 
TCGGGAGCAC AGGCGCAGGA ATATCCTGCC GGCAAGCCCG TGCAGGCGGT GGTGCCGTTT
GCTGCTGGCG GCCCGACCGA CAAGGTCGCG CGCGAACTGA CGATGGTGAT GTCCAAGCAC
CTGGGCACCA CGATCGTGAT CGAAAACCTG GGTGGCGCCG GCGGCACGAT TGGCGCCAAG
AAGGTGGCTC AGTCCAAGGG TGACGGCTAC ACGATCCTGA TCCACCACAT CGGCATGTCC
ACCGCCCCGG CGCTGTACCG CAACCTGGGC TTCGATCCGC TCAAGGACTT CGAGATGGTC
GGCGAGATCG CCGACGTGCC GATGGTGCTG GTGGGTAACA AGCAACTTCC GCCGGCCAGC
TTCAAGGAGC TGGTGCCGTA CATCAAGGCC AATTCCAGCA AGCTGTCGCT GGCCAATGCC
GGTATCGGCT CGGCCTCGCA CCTGTGCGGC CTGCTGTTCC AGAGCGCAAT CCAGACCGAA
CTGACCACCG TGCCGTACAA GGGTACTGCG CCGGCGCTGA CCGACATCCT CGGCGGCCAG
GTGAACCTGA TGTGCGACCA GACCACCAAC ATCGCCGGCC AGCTCAAGGC GGGCGCGCTC
AAGCCGTACG CGGCAATGCA GCCGCGCCGC GTGGAAGCAT TCAAGGACAT CCCGACCGCC
GCCGAGCAGG GCCTGCCGGG TGTGGAAGTG AAGATCTGGC ACGCGATGTA CGCGCCGAAG
GGCACGCCGA AGCCGGTGAT CGACAAGCTG TCGGCCGCGC TGCAGAAATC GGTGGCCGAC
CCGAACTTCC GCGCCAAGAT GGCTGAACTC GGTGCCGAGG CCGTGCCGGC CCAGCGCGCC
ACGCCGGATT CGCTGCGCGT GTTCCTGGCG TCGGAAATCA ACAAGTGGAC GCCGGTGATC
AAGAAGGCGG GTGTCTACGC GGACTGA
 
Protein sequence
MKRVALKFAA VLAVAGVGVF SGAQAQEYPA GKPVQAVVPF AAGGPTDKVA RELTMVMSKH 
LGTTIVIENL GGAGGTIGAK KVAQSKGDGY TILIHHIGMS TAPALYRNLG FDPLKDFEMV
GEIADVPMVL VGNKQLPPAS FKELVPYIKA NSSKLSLANA GIGSASHLCG LLFQSAIQTE
LTTVPYKGTA PALTDILGGQ VNLMCDQTTN IAGQLKAGAL KPYAAMQPRR VEAFKDIPTA
AEQGLPGVEV KIWHAMYAPK GTPKPVIDKL SAALQKSVAD PNFRAKMAEL GAEAVPAQRA
TPDSLRVFLA SEINKWTPVI KKAGVYAD