Gene Rmet_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0083 
Symbol 
ID4036867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp90102 
End bp91106 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content67% 
IMG OID637975455 
Producthypothetical protein 
Protein accessionYP_582238 
Protein GI94309028 
COG category[S] Function unknown 
COG ID[COG5373] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCATTC TGCTGGTGGT GGCCGCCCAT TTGCTGGCGC TGCTGCGTCT GGTTCATGCG 
CCGGCGCCGA GCCTGCCCGA TATCGAGCCG ACCCCAACGC TCGACGCCAT CCTGCTGCCG
CCGCCCAAGC CACCGGCTCC GCCGGCGCCT CCTCCGCCCG TGCCCGCGCC ACGACCGGTG
CCGCAGCCGC CAGCCCCTTC ACCACCGCCA AAACCTGCGC CGCCGGAACC CGCGCCGGCA
CTCGCCACGG CGGAAAGCGG CCAGACCACG ACAACCACCG GATCAGGCGG AGAGGGATCG
GCGGCGGCTG CGCCGCCCGC AGCGACGCCG GCAGCCCCAG CGGCCCCACC GAGCCCGCCC
GCGCCCAGGT ACGACGCACC GCCGTCGGTG GTGCTGCGCT ATGCCAGTTT TGTCAATGGC
GTGCAGAACC CCGATGGCCG GATCACGTGG CAGCAGGACG GTCAGCACTA CCGGCTGGCG
GTGGAAACCC GCGTGCTCTG GTTCCGCTTT GCGTTTCAGA GCTCGGGCGA CATGAACGAC
GGGGGGCTGA ATCCCACACG TTACGAGGAG GCCCGGCGCA GCAAGGTCGA AGTCGCCCGC
TTTGATCGCA CGGCAGGCAC AGTGGTGTTT GAAACGCGTG GCGGACAGGT GCCAATGCCG
TCAGCATTCC AGGACCGCTT CAGCGTGTTC CTGCAACTGG TTGGGTGGGC GCGGGGCGAT
CCGCAGCGCT ATGCGACCCC GGGCGTGACG GAGACGTTCA ACGTGTCCGA CACGCGGGAA
GTGGAAGTCA TGCAGGTGCA GTACGTTGGC GAACAGGACA TTGATATCGG TATCGACAGG
GTGCGCACGA AGCACTTCGT GCGCCTGCCG CGCCACCCGA ACGACAAACG CAAGGTGGAA
ATCTGGCTGG CGCCGTCCCT GAACTGGATG CCGGCGCGTC TGCGTCAGAC GGAGCCTGAT
GGCACTCAGA TCGATCTCGT CTATCGTAGT AGTGAGACAC ATTGA
 
Protein sequence
MVILLVVAAH LLALLRLVHA PAPSLPDIEP TPTLDAILLP PPKPPAPPAP PPPVPAPRPV 
PQPPAPSPPP KPAPPEPAPA LATAESGQTT TTTGSGGEGS AAAAPPAATP AAPAAPPSPP
APRYDAPPSV VLRYASFVNG VQNPDGRITW QQDGQHYRLA VETRVLWFRF AFQSSGDMND
GGLNPTRYEE ARRSKVEVAR FDRTAGTVVF ETRGGQVPMP SAFQDRFSVF LQLVGWARGD
PQRYATPGVT ETFNVSDTRE VEVMQVQYVG EQDIDIGIDR VRTKHFVRLP RHPNDKRKVE
IWLAPSLNWM PARLRQTEPD GTQIDLVYRS SETH