Gene Rmet_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0081 
Symbol 
ID4036865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp88108 
End bp89148 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content66% 
IMG OID637975453 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_582236 
Protein GI94309026 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCCGC GCCGCTCCGG TAGACTGTGG CCCATCCGAT TTGCCTATGT TCGACTCCGC 
ATGAAACTCG CCACCCTGAA GGATGGTTCG CGCGACGGCC AGCTCGTCGT TGTCTCGCGC
GACTTGAAAA CCGCGCACTT CGCCACCGAT ATCGCAGGCA AGCTCCAGAC CGTGCTCGAC
GACTGGGCCT TCTACGCGCC GCAGCTCCAG GACCTGTATG ACGCGCTGAA CGCCGGCCGG
TCACGCCACC CGTTCCCGTT CCAGACCAAG GACTGCATGG CGCCGCTGCC GCGCGCGTAC
CAGTGGGCCG ACGGCTCGGC CTACGTGAAC CACGTGGAAC TGGTGCGCAA GGCGCGCGGC
GCGGAGATGC CGCCCGAGTT CTGGACCGAC CCGCTGATGT ATCAGGGCGG CTCCGACGAC
TTCATCGGCC CGCAGGACGA CATCGTCTGC GCCAGCGAGG CCTTCGGCAT CGATTTCGAG
GCCGAAGTGG CCGTGATCAC CGGCGACGTG CGCATGGGCG CCACCCCCGA CCAGGCCGGG
GAGGCCATCC GGCTGGTGAT GCTGGCCAAC GATGTTTCGC TACGCAACCT GATCCCGGCC
GAACTCGGCA AGGGTTTCGG CTTCTTCCAG AGCAAGCCCG CCACGGCGTT TTCGCCGGTG
GCGGTCACGC CGGACGAACT CGGCGACGCC TGGCGCGAGC GCCGCGTGCA TCGCCCGATG
GTGGTCCACT GGAACAGCAA GAAGGTGGGC TCGCCCGACT GCGGCACCGA TATGGTGTTC
GACTTCGGCC AGCTGATTGC CCACATCTGC AGGACGCGCA ACGTGCGCGC GGGCAGCATC
GTCGGCTCGG GCACGATTTC GAACGTCGAT CGCAGCAAGG GGTACTGCTG TATCGCCGAA
AAACGCATGA TCGAGACGAT CGACGGCGGC AAACCCGAGA CCGAGTTCAT GAAGTACGGC
GATGCCGTCC GTATCGAGAT GTTCGACGCC GAACACAAGT CGATCTTCGG CGCGATCGAC
CAGGTGGTGG CCGCACCATA A
 
Protein sequence
MRPRRSGRLW PIRFAYVRLR MKLATLKDGS RDGQLVVVSR DLKTAHFATD IAGKLQTVLD 
DWAFYAPQLQ DLYDALNAGR SRHPFPFQTK DCMAPLPRAY QWADGSAYVN HVELVRKARG
AEMPPEFWTD PLMYQGGSDD FIGPQDDIVC ASEAFGIDFE AEVAVITGDV RMGATPDQAG
EAIRLVMLAN DVSLRNLIPA ELGKGFGFFQ SKPATAFSPV AVTPDELGDA WRERRVHRPM
VVHWNSKKVG SPDCGTDMVF DFGQLIAHIC RTRNVRAGSI VGSGTISNVD RSKGYCCIAE
KRMIETIDGG KPETEFMKYG DAVRIEMFDA EHKSIFGAID QVVAAP