Gene Rmet_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0056 
Symbol 
ID4036840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp64826 
End bp65497 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID637975428 
Producthypothetical protein 
Protein accessionYP_582211 
Protein GI94309001 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0180096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTC AAGACGTTGC CGCTTACCTG CAGAGCCATC CGCAGTTTTT CGAAGATCAC 
GCCGAACTGC TGGCGACGGT GCAACTGACC AGCCCGCACA GCCATCGGGC GGTGTCGCTG
CAGGAGCGCC AGATGGAAAT CCTGCGCGAG AAGAACAAGG GTCTGGAACT CAAGCTGGCC
GATCTCGTCC GGCACGGCCA CGAGAACGAT CGCACGCAGC AGCGTATGCA TGACTGGCAG
ATGCGCCTGC TGGCCGAGGC CGATTCCCAC GCGCTGCCCT ATGCGGTGCG CGACGGCCTG
CAGCAGGTGT TCGACGTGCC CGCCGTGGGG CTGCGCCTGT GGAGCGTCGG TGAGACCTAT
GCCCACATGG AAGTGGCGCA GGGTGCCAGC GATGACCTGC GCCTGTTCGC CGAAGGCCTG
CGCGCGCCGT TCTGCGGCGC GAACGCCGGT TTCGAGGCCG CTCAGTTGCT GGAGCGCGAC
GACGTCGCGT CGCTGGCGAT GGTGGCGCTG CGCGTGCCGG CCAAGCCCGA CGAGGACGGC
CCGGGCGCGG CGTTCGGCCT GCTGGTGCTG GGCTCGCCCG ACGCGCGCCG CTTCCATGAG
GGTATGGGCA CTGCCTATCT GGCCCAGATC GGCGAAGTCG CCGGCGCGGC GCTGAATCGC
CTGCGCGACT AA
 
Protein sequence
MNAQDVAAYL QSHPQFFEDH AELLATVQLT SPHSHRAVSL QERQMEILRE KNKGLELKLA 
DLVRHGHEND RTQQRMHDWQ MRLLAEADSH ALPYAVRDGL QQVFDVPAVG LRLWSVGETY
AHMEVAQGAS DDLRLFAEGL RAPFCGANAG FEAAQLLERD DVASLAMVAL RVPAKPDEDG
PGAAFGLLVL GSPDARRFHE GMGTAYLAQI GEVAGAALNR LRD