| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0047 |
|---|
| Symbol | |
|---|
| ID | 4036831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 54086 |
|---|
| End bp | 55156 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637975419 |
|---|
| Product | dienelactone hydrolase |
|---|
| Protein accession | YP_582202 |
|---|
| Protein GI | 94308992 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGCC GACCGCACCT TTCCACGCTG ACCCCCACGC CGCTGGTTCC GACCATGGCG
GGGCACTGGC TGCGCGCGAG CGTGGCGGCG GTGGCCATCG GCATGGCGCT CCTGCAGGCC
GCGCCCGCGC AGCCTGCTGT GTCATCGGCA GTACCGTCGG CGGCGCCGGC CGCTTCCGCC
AGCGCACCCA TGACACCGGC AGCGGCGGCC ATGGAACCAG CGGCCCAGCG GGTGCGCATT
CCCGGCGATG GCGGCTCGCC GGAGCTGACC GGATACTGGT TCACACCCCG CGATGGTGGC
CTGCCGCGTT CGCAGCCACT GCCCGTGGTA GTGGCACTGC ACGGTTGCAA TGGTCTGATC
GACATGCGCG TGGCCGCGAA ACGCGCGGGC ACGATCGAGG AAGTCATCGA TCCGGCCGGC
GCGCTGCAGA GCCGCTACCG CGAGTACGCG CACTGGCTTG CCGAGCGCGG CTATGCGGTG
CTGATGCCGG ACAGCTACAG CGTGCGCGGC AGGGCCCAGG GCACTTGCGG CGACGCCCTC
GAATCGCGTG CGATCGACGA CCGGACACGC CGCAGCGACG CACTGGCCGC AATGCGATGG
GTATCCCGGC AACCTGGCAT CGATGCCCGC CGCATCGTGC TGCTGGGCTG GTCCAACGGT
GCGCAAGCCG TGCTGGCCAC GATCGACGCC AGCCGGCCCT GGCCCGGCGG CACGCCCACG
GTGGACCGTG CGGTGGCGTT CTATCCGGGA TGCAAGCGCG CGGTGCAACA GCACAACTTC
CGGCTGCGCT CGCCGCTGCT GCTGCTGATC GGCGGCGCGG ACGACTGGAC GCCCGCCACG
CGCTGCGCGA TGCTGCAGAA CGCCGTGCAG TCGCGGCAGC CGGGGGCGCG CTTCCGGCTG
GAGATCTATC CGGGCGCGTA CCATGGCTTC GACGGCACGA GCGAACTGCA TGTGCGGCGC
GATGTGATCG CAGCGCGGCG CAACGGCGGC GTCACGGTGG GCGGCGATGC CGTGGCCCGC
GTGGCAGCGC TGGGACAGCT CGATTCATGG CTTGCGAGCC CGGATCCCTG A
|
|---|
| Protein sequence | MRRRPHLSTL TPTPLVPTMA GHWLRASVAA VAIGMALLQA APAQPAVSSA VPSAAPAASA
SAPMTPAAAA MEPAAQRVRI PGDGGSPELT GYWFTPRDGG LPRSQPLPVV VALHGCNGLI
DMRVAAKRAG TIEEVIDPAG ALQSRYREYA HWLAERGYAV LMPDSYSVRG RAQGTCGDAL
ESRAIDDRTR RSDALAAMRW VSRQPGIDAR RIVLLGWSNG AQAVLATIDA SRPWPGGTPT
VDRAVAFYPG CKRAVQQHNF RLRSPLLLLI GGADDWTPAT RCAMLQNAVQ SRQPGARFRL
EIYPGAYHGF DGTSELHVRR DVIAARRNGG VTVGGDAVAR VAALGQLDSW LASPDP
|
|---|
| |