Gene Rmet_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0044 
Symbol 
ID4036828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp48933 
End bp51581 
Gene Length2649 bp 
Protein Length882 aa 
Translation table11 
GC content68% 
IMG OID637975416 
Producthypothetical protein 
Protein accessionYP_582199 
Protein GI94308989 
COG category[S] Function unknown 
COG ID[COG2307] Uncharacterized protein conserved in bacteria
[COG2308] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCTCGC AGTCGTCACT GCCTCTTGAA GGACCCGATG CGCCTGCCCT GATGGCTGGC 
CAACTGGCGC TGCCCGTGCC GGATGGCCAC CTCGACGAGT TGCGCCTGCC AGATGGCGCG
TTGCGCGAAT GCTGGGCACG CTTCTTCTCG GTACTCGGCG ATCCACCGCC AGACGTACTG
AATGCCCACG CGTCTGCCGT GGCGCGGCAG ATTCGCCAGA ACGGCGTCAC GTACAACATC
CGTGCCGACC AGGGCGATGG CGCGCGCGCG TGGCAACTCG AAGTGTTTCC GCTTCTGGTG
CCGGAGCAGG ACTGGGCCAC TATCGAAGCG GGCGTGGCGC AGCGCGCGAC GTTGGCCAAC
GCGATCATGG CCGACATCTA CGGCCCACAG CTGCTGCTCA AGCGCGGCCT GCTGCCACCG
GGGCTCGTCT ACGGGCATCC CGGCTACATG CGGCCACTAA AGGGATACCG GCCGCCGGGT
GGCAGCTACC TGCAGACCGT GGCAGTCGAC CTCGTCCATA CCGCGAGCGG CTGGACCGTG
ATTGCGCATC GGACGGAGAC GCCGTCCGGC ATGGGCTATG CGCTCGAAAA TCGCCTGATC
GTCTCGGGCC AGTTCGCCGA GGCGTTCCGC GAGATGCGTG TGCGGCGGCT CCCGCAGGCG
TTCGCCCAGT TGATCTCCAC ACTCGCGCTG GCGCCGCTGA CGCCGCTGAC GCCGCTGGGG
GGCGAGCCCG GCAGCCCGAG ACCCTTGCAG GCGGGGCGGC AGATCGTGCT GCTATCGCCG
GGGCCATACA ACGAGACGTT CTTCGAGCAC ACGTTCCTGG CGCGCTATCT CGGCATCACC
CTGGTCGAAG GCAAGGACCT GACCGTGCGC AATGACGTGG TCTATCTGAA GACGTTCGGC
GGTCTGGAGC GCGTGGACGT GATCCTGCGT CGCCTCGACG ATGTGTTCTG CGACCCCCTC
GAACTGCGCG GCGATTCGAT GATCGGCGTG CCGGGCCTGC TCGAAGCGAT GCGTGCGGGC
AATGTGATGG TGTCGAACGT GCCGGGCTCT GGCTTTCTCG AGTCGCCCGC GATCCACGGT
TTCCTGCCCG GCGTGGCGCA GGCGTTGCTC GGCGAACCGC TGGTCCTGCC GGCGGTGTCG
AGCTGGTGGT GCGGCGAGGC GCCGGCGTGG CAGGAGGCAC TGGGTCTGCT TGACGAAGCG
TTCGTGATGC CCACCTATCC GCGCACGCCT GCAGACGCGC CGCTTGGCAT GGAGCAGGGG
CTGCAGACGC TGGCGGACTG GCGCGCGCGC ATCGACGCGT CGCCCGATCG CTATACCGTG
CAGGCGCCGC TGCCGCTCTC GCATATGCCG TGCTGGGAAC CCGACGGCCA TGGCGGCGGC
CGCATTGGCT CGCGCCCGGC CATGCTGCGG GTTTATGCGA TTGCCGATGG CAATGGCGGC
TGGCAGGTGA TGCCGGGCGG ATTCACGCGT CTGGCCCCGC CGCATCGCGA GGCGGTATCG
ATGCAGATCG GCGGTACCAG TGCCGACACG TGGGTGTTGT CGAGCCAGCC GACGCACGCG
GTGCCGCTGA CCTCGGCGCG CGCCGGTTTG GCGGCGATGA GCGCGACGGC AGGATCGGCG
CTTGCCCGGC AGCTGACGGT GTCGAGCCGC GCGGCCGAGA ACCTGTACTG GGCGGGCCGC
TACGCCGAGC GCGCCGAGAA CCTTGTGCGT CTGTGCCGGC AAATCCTTGG TTCGATCGAA
TCGAACGACG AAACCGACGA CGGCACGCTG ACGATGATCG GTGACCTGGC AACGTGGTTC
GGGCTGGTGC CGCCGCAGAC GCCATCGCCG CGAGCATCGT TGAGAGCGTT CGAACATGCC
CTCGTTTCCA CGCTGGCCAA CCCTGACGCG GACTCCGGGC TGGGCCCGAC GCTCGCCAGC
CATGCCGGCG CCGCCAACGA GATCCGCAAC CGGCTCTCGA ACGATCACTG GCGCACGATC
TTGGCCGCGC GTAATGACTT TCGCGATGCG ATGCAGGCAG CCTGCCCAGA TGGTCCATCG
GCGGGGGAGG GCACTTACGA TCGCTCGAAG GTGCTGGCAG CGCTCGAGCA CCTGTCGATG
CAGCTTGGCG CGATCAGCGG CGCGCAGGGC GACCGCATGG CGCGCGACGT GGCGTGGCGG
CTGGTATTCA TCGGCCGCCA TATTGAACGG CTCGGCACGC TGGCGCTGTT CCTGGAAGTG
GCCGAGCGCA GCGGCGCGCT GTACTCGCGC AGTGGTGTGG ACCTGCTGCT GCATCTGTTC
GACAGCACGT TGTCGTTCCG ATCGCTGTTT CCCGGCCGCG CCGATGTACC TGCGCTGGTC
GATCTGCTCG TGCTCGATCC GACCAATCCG CGCGGCATCT ATGGTGTGCT GGATCGCTTG
CGCGCCAAGC TCGTGCAACT GCCCACCGGC GCCACGGGGC AGACGCGTGT GCCGCTGGCG
GAGATGCTGC CGCCAGCCAG CGCGCTACCT TCGCGCACGC TGCTGTGCGC GAGCAATCGG
CAGGGGCGTC AGACCACGCT CGGGGCGCTG TGTGATCAGC TTGGCGCGCG CATGGCAAAG
TTGTCCGAAG AGATCGGCGG CCGCTACTTC AGTCATGCCG GCGTGACAAT CGAAACCGAA
CTGCCATGA
 
Protein sequence
MPSQSSLPLE GPDAPALMAG QLALPVPDGH LDELRLPDGA LRECWARFFS VLGDPPPDVL 
NAHASAVARQ IRQNGVTYNI RADQGDGARA WQLEVFPLLV PEQDWATIEA GVAQRATLAN
AIMADIYGPQ LLLKRGLLPP GLVYGHPGYM RPLKGYRPPG GSYLQTVAVD LVHTASGWTV
IAHRTETPSG MGYALENRLI VSGQFAEAFR EMRVRRLPQA FAQLISTLAL APLTPLTPLG
GEPGSPRPLQ AGRQIVLLSP GPYNETFFEH TFLARYLGIT LVEGKDLTVR NDVVYLKTFG
GLERVDVILR RLDDVFCDPL ELRGDSMIGV PGLLEAMRAG NVMVSNVPGS GFLESPAIHG
FLPGVAQALL GEPLVLPAVS SWWCGEAPAW QEALGLLDEA FVMPTYPRTP ADAPLGMEQG
LQTLADWRAR IDASPDRYTV QAPLPLSHMP CWEPDGHGGG RIGSRPAMLR VYAIADGNGG
WQVMPGGFTR LAPPHREAVS MQIGGTSADT WVLSSQPTHA VPLTSARAGL AAMSATAGSA
LARQLTVSSR AAENLYWAGR YAERAENLVR LCRQILGSIE SNDETDDGTL TMIGDLATWF
GLVPPQTPSP RASLRAFEHA LVSTLANPDA DSGLGPTLAS HAGAANEIRN RLSNDHWRTI
LAARNDFRDA MQAACPDGPS AGEGTYDRSK VLAALEHLSM QLGAISGAQG DRMARDVAWR
LVFIGRHIER LGTLALFLEV AERSGALYSR SGVDLLLHLF DSTLSFRSLF PGRADVPALV
DLLVLDPTNP RGIYGVLDRL RAKLVQLPTG ATGQTRVPLA EMLPPASALP SRTLLCASNR
QGRQTTLGAL CDQLGARMAK LSEEIGGRYF SHAGVTIETE LP