Gene Rmet_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0042 
Symbol 
ID4036826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp47311 
End bp48006 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content66% 
IMG OID637975414 
Producttwo component transcriptional regulator 
Protein accessionYP_582197 
Protein GI94308987 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.189828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTTG ATTATTCGCC GACCGTGTTG CTGGTCGAGG ACGAACCCCA CATCCGCCGC 
TTCGTGCGTG AATCGCTGCA GTCCGAGGGC TGCACGGTGC ACGAGGCCGA TACGCTCAAG
CGCGGCCTGA TTGACGCCGG CACGCGCCAG CCGGATGTGG TGATCCTGGA CCTTGGCCTG
CCTGATGGCG ATGGCATGAC ACTGATCCGC GAGATGCGCA CCTGGACCGA GGTGCCTGTG
CTGGTGCTAT CGGCACGCAC TGGCGAAGCC GACAAGATCG CCGCGCTCGA TGCGGGCGCG
GACGACTACC TGACCAAGCC GTTCGGCGTC GGTGAACTGG TGGCGCGCGT GCGCGTGCTG
CTGCGCCGGC ACGCCAAGGC GAATCCACAA GGCACGCCCC AGATCACGTT CGGCGACGTG
CGCGTGGACC TGGCCAACCG GCTCGTCACG CGCGGCGAAG ATCAGGTGCA TCTGACGCCG
ATCGAATACC GCCTGCTGGC CGTGCTGATC GCCAATCGTG GCAAGGTCAT GACGCACCGG
GAACTGCTGC GCGAGGTCTG GGGCCCCTCG CACTCGGAGA GCAGCCACTA CCTGCGGGTC
TATATGGGCC ACCTGCGCCA CAAGCTCGAG GTCGATCCGG CCCAGCCCGC GCATCTGCTG
ACAGAGGTGG GCGTCGGATA CCGGTTCGCC GGCTGA
 
Protein sequence
MPFDYSPTVL LVEDEPHIRR FVRESLQSEG CTVHEADTLK RGLIDAGTRQ PDVVILDLGL 
PDGDGMTLIR EMRTWTEVPV LVLSARTGEA DKIAALDAGA DDYLTKPFGV GELVARVRVL
LRRHAKANPQ GTPQITFGDV RVDLANRLVT RGEDQVHLTP IEYRLLAVLI ANRGKVMTHR
ELLREVWGPS HSESSHYLRV YMGHLRHKLE VDPAQPAHLL TEVGVGYRFA G