| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0017 |
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| Symbol | |
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| ID | 4036801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 20369 |
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| End bp | 21955 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637975389 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_582172 |
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| Protein GI | 94308962 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCGA CCGCCCCCGC CAGCCAGTCC ACCGCAGAGG CCCTAGAGGC CACAGCTTCC
CTCCCCCAAG CCGCCGTTCA CGATCACGCG TCGATCATGC GTGTGATCGG TGGCATCGTG
CTGTGCATTC TGCTCGCGGC GCTCGACCAG ACCGTGGTGA TCCCGGCCGT GCCGGCGATC
GCGAACGATC TCAACGGATT CGGGCACCTG TCGTGGATCG TGACCGCGTA CCTGATCGTG
TCGACGGTGA CCACGCCGCT GTACGGCAAG CTGTCCGACA GTTTCGGGCG TCGCCGTCTG
CTGATGGTGG CGATCTCGCT GTTCATCCTG GCCTCGGTGG CCTGCGCGCT GGCGCAGACG
CTGCCGCAGC TAATCCTGTT CCGCGCGCTG CAGGGCCTCG GCGGTGGCGG CCTGATGTCG
CTGGCGCAGG CGGCCATTGC CGACGTGGTG GCGCCGCGCG AGCGCGGCCG CTATCAGGGC
TATCTGGCCA CGGTCTGGGC GATCTCGTCG ATCGCGGGGC CGCTGGTAGG CGGCTGGGTG
TCCGATCACA TGTCGTGGCG CTGGCTGTTC TGGATCAACG TGCCGCTCGG TCTGCTGGCG
ATGACCATGT GCTATCGCGG GCTCGCGCAT CTGAAGCCGC GCGGCGGCCG GCCCCAGGTC
GATTGGCTAG GCGCCCTGCT CCTGGCCGTG GCCATTGTCG CGTTCCTGCT TGCCATGAGC
TGGGGCGGCG AGGCGTTCGC CTGGATCTCG CCCGAGATGG CCGCCCTGCT GGCGATCTCG
CTAGTGGCCG TGCTGTTGCT GGCCTGGCAG GAGCGCCGCG CCGCCGACCC GATGCTGCCG
CCGCGCCTGT TCCGCAATCG CGCCTATGTG ATGGGCGTGG GCGCATCGGC GCTGGCCGCG
CTCAATATCT TCCTGTGCAT CTTCGCCCTG CCCCTGCATT TCCAGCTTGT TCGTGACGCC
GATGCGTCGA TGTCGGGCCT GCTGGTGGTG CCGTTCCTGC TGGCGACCGT CGCCGGCAAC
TTCGTGGTGG CATGGCTCGC GCCGCGTCTG GGCCGTATGC GCGTCATCCT GACCATCGGC
TTCGTTGCCG CGGCGGTCGG GCTAGTCTCG CTGGCTGCCG TGACGGTCGC CGTACCGACC
TTCTTCGTTC TGCTGGCGAT GACGATCGGC GGTATCGGCC TGGGTATGGC GATGGTTGGC
ACGCTGATCA GCGTGCAGAA CGCGCTGGAG CGCCGTGACA TGGGCGCGGG CACCGGCGCC
TTGCTCGTGC TGCGTTCGCT CGGCAGCTCG ATCGGTGGCG CGCTGGCCGG CACGCTGCTG
GCCATGGAGT TTCGCGACGC GCTGGCCCGG GCCGGCGTCA CGCAGGCGCT GGACCTTGGC
GCGCTACGGC ATGGCAGCGA GGCGCTGGCG CACCTGTCGC CAGCCGTGCG CCATGTGCTG
GCTGGCGGCG TGGAATCGGG CTTTCATCTG ATTTTTGCGG CCGGCGCGGT GGCCACGATC
ATCGCGCTGC TGATCGTGCG TCGGATGCCG GATCTGGAAC TGCGCAGCAG CGTGACCGAG
CACGCGGCCA AGATCCACAT GGAATAA
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| Protein sequence | MSSTAPASQS TAEALEATAS LPQAAVHDHA SIMRVIGGIV LCILLAALDQ TVVIPAVPAI
ANDLNGFGHL SWIVTAYLIV STVTTPLYGK LSDSFGRRRL LMVAISLFIL ASVACALAQT
LPQLILFRAL QGLGGGGLMS LAQAAIADVV APRERGRYQG YLATVWAISS IAGPLVGGWV
SDHMSWRWLF WINVPLGLLA MTMCYRGLAH LKPRGGRPQV DWLGALLLAV AIVAFLLAMS
WGGEAFAWIS PEMAALLAIS LVAVLLLAWQ ERRAADPMLP PRLFRNRAYV MGVGASALAA
LNIFLCIFAL PLHFQLVRDA DASMSGLLVV PFLLATVAGN FVVAWLAPRL GRMRVILTIG
FVAAAVGLVS LAAVTVAVPT FFVLLAMTIG GIGLGMAMVG TLISVQNALE RRDMGAGTGA
LLVLRSLGSS IGGALAGTLL AMEFRDALAR AGVTQALDLG ALRHGSEALA HLSPAVRHVL
AGGVESGFHL IFAAGAVATI IALLIVRRMP DLELRSSVTE HAAKIHME
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