Gene Rmet_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0009 
Symbol 
ID4036793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp13040 
End bp13972 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content62% 
IMG OID637975381 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_582164 
Protein GI94308954 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC TATCGGCCAC CCTTGGCAGA CCGGACCACG AGACGTCGGA TACGCCGGAT 
GATGACCGCA GGCTAGGCGC AATGATGCTG GCGCCTGCAC TCATCTATAT CGCGCTGCTG
CTTGGCTTTC CTTTCCTGCT GTCGATCTGG TACAGCCTGA CCGATGTCAC CGTCGGAAGT
CCGATGCCGC ATTTCATCGG GCTGGAGAAT TTCCGGAGCG TCGTAGCGAA CCCGACGTTC
TGGCAATCGC TGCGCAACGC GCTGGTGTTC ACGCTGGTCT CGCAAGCGCT GGTGGTCGTG
CTCGCCAAAG CGCTGGCGCT GGCGTTGGTG CGTGACTTCC CCGGCAAGTG GCTCGTGCGA
CTGCTGATCC TGTTGCCATG GGTGGCGCCG ATCTCGCTGG GATCGATTGG CTGGTTGTGG
ATCTTCGACC CGGTCTACAG CATCATCAAC TGGACGTTAC GCGCGATCGG CCTTTTCGGC
CCTAACACGT GGCCGATCTG GCTCGGCCAG CCTGATCTGG CAATGGCGTC CGTGATTCTG
GTGGATGTCT GGCGATTGCT GCCACTGGCC ACCGTCATCA TCCTGGCCGG GATGCAAGGC
ATCCCGCAGG ATCTGCACGA TGCCGCTGCC ATGGACGGCG CAGGCTTCTG GCGGCGGCTG
TTCAGGATCG ACGTGCCGTT GCTGATGCCG GTCATGCTGG TGGCCCTGTT GTTCGGCATC
GTCTTCACGC TGACCGACAT GGTCATCATT TACGTGCTCA CGCGCGGCGG CCCCTACGAT
ACGACCCAGG TGCTGGCCAG CCTGGCCTTC TTTACAGGCA TACAAGGCGG TGATCTGGCT
GAAGGCGCAG CGATCTCGCT TTTCCTGTTT CCACTGCTGG TGGCAGTCGT CACGTTGCTG
CTGACTGTGG CGCATCGCTC CGAGGTGACG TGA
 
Protein sequence
MSALSATLGR PDHETSDTPD DDRRLGAMML APALIYIALL LGFPFLLSIW YSLTDVTVGS 
PMPHFIGLEN FRSVVANPTF WQSLRNALVF TLVSQALVVV LAKALALALV RDFPGKWLVR
LLILLPWVAP ISLGSIGWLW IFDPVYSIIN WTLRAIGLFG PNTWPIWLGQ PDLAMASVIL
VDVWRLLPLA TVIILAGMQG IPQDLHDAAA MDGAGFWRRL FRIDVPLLMP VMLVALLFGI
VFTLTDMVII YVLTRGGPYD TTQVLASLAF FTGIQGGDLA EGAAISLFLF PLLVAVVTLL
LTVAHRSEVT