Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0009 |
Symbol | |
ID | 4036793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 13040 |
End bp | 13972 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637975381 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_582164 |
Protein GI | 94308954 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGC TATCGGCCAC CCTTGGCAGA CCGGACCACG AGACGTCGGA TACGCCGGAT GATGACCGCA GGCTAGGCGC AATGATGCTG GCGCCTGCAC TCATCTATAT CGCGCTGCTG CTTGGCTTTC CTTTCCTGCT GTCGATCTGG TACAGCCTGA CCGATGTCAC CGTCGGAAGT CCGATGCCGC ATTTCATCGG GCTGGAGAAT TTCCGGAGCG TCGTAGCGAA CCCGACGTTC TGGCAATCGC TGCGCAACGC GCTGGTGTTC ACGCTGGTCT CGCAAGCGCT GGTGGTCGTG CTCGCCAAAG CGCTGGCGCT GGCGTTGGTG CGTGACTTCC CCGGCAAGTG GCTCGTGCGA CTGCTGATCC TGTTGCCATG GGTGGCGCCG ATCTCGCTGG GATCGATTGG CTGGTTGTGG ATCTTCGACC CGGTCTACAG CATCATCAAC TGGACGTTAC GCGCGATCGG CCTTTTCGGC CCTAACACGT GGCCGATCTG GCTCGGCCAG CCTGATCTGG CAATGGCGTC CGTGATTCTG GTGGATGTCT GGCGATTGCT GCCACTGGCC ACCGTCATCA TCCTGGCCGG GATGCAAGGC ATCCCGCAGG ATCTGCACGA TGCCGCTGCC ATGGACGGCG CAGGCTTCTG GCGGCGGCTG TTCAGGATCG ACGTGCCGTT GCTGATGCCG GTCATGCTGG TGGCCCTGTT GTTCGGCATC GTCTTCACGC TGACCGACAT GGTCATCATT TACGTGCTCA CGCGCGGCGG CCCCTACGAT ACGACCCAGG TGCTGGCCAG CCTGGCCTTC TTTACAGGCA TACAAGGCGG TGATCTGGCT GAAGGCGCAG CGATCTCGCT TTTCCTGTTT CCACTGCTGG TGGCAGTCGT CACGTTGCTG CTGACTGTGG CGCATCGCTC CGAGGTGACG TGA
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Protein sequence | MSALSATLGR PDHETSDTPD DDRRLGAMML APALIYIALL LGFPFLLSIW YSLTDVTVGS PMPHFIGLEN FRSVVANPTF WQSLRNALVF TLVSQALVVV LAKALALALV RDFPGKWLVR LLILLPWVAP ISLGSIGWLW IFDPVYSIIN WTLRAIGLFG PNTWPIWLGQ PDLAMASVIL VDVWRLLPLA TVIILAGMQG IPQDLHDAAA MDGAGFWRRL FRIDVPLLMP VMLVALLFGI VFTLTDMVII YVLTRGGPYD TTQVLASLAF FTGIQGGDLA EGAAISLFLF PLLVAVVTLL LTVAHRSEVT
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