| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0001 |
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| Symbol | dnaA |
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| ID | 4036785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 104 |
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| End bp | 1843 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637975373 |
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| Product | chromosomal replication initiation protein |
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| Protein accession | YP_582156 |
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| Protein GI | 94308946 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGATT TCTGGCAGGC AGCAGCCGCG CAACTCGAGC GCGAACTGAC GCCGCAACAG
TTCAAGACCT GGATCAAGCC GTTGGCGCCC GTGGCCTTCG ACGAGGAAGC GCATGCGCTG
CGGATTGCCG CGCCCAATCG CTTCAAGCTT GACTGGGTCA AGAGCCAATT TTCGGGTCGG
ATCACGGCCC TTGCGTGCGA GTACTGGGAA ACGCAGGTTA GCGTTCACTT CGTGCTCGAC
CCCGCTGCAT CGGGGCGCGC GGCCGCATAT ACCCAGCAAG CAATGCAACA GGGCCAGGAT
GCGCCCGCTG CAATGGGTAC GGCCATGGGC GCAGGCCATG CGCCTTATCC GGGCATGGCT
GGCATGGCCG GAGGCCAATC CTACGGGCCG GCTGGCGCGC AGGTTCCCGG CGCGCATCCG
AACCAGATGG CTGGATATCC CGACTATCCC AGCCAGTCCA ATGGCGCGCC CGCTGGCTAT
GGCGGCGCGG CGGGTGGACA AACGCCCTAT TCCCAGTCGC AGCAGTCCGC GCAGGGACGC
GGCGCGGCAC CCACCGGGCA TCCGCTTCAG GGCAATTCGG CCGCGCATTT GCCGGACATG
GGCGAGATCG ACGTGGCCCA GATGGACCCG GCCGAAGCCA GCGCCCGCTC CTATCGCGTG
CCGTCGCCGC AGCCGGCAGC GCCGGCCGGG GCGCAGCAGC AGAGCGACAC GGTGCACGAG
CGCTCGCGCC TGAACCCGAT CCTGACGTTC GACAACTTCG TCACCGGCAA GGCCAACCAG
CTCGCGCGTG CCGCGGCGAT CCAGGTGGCC AACAACCCGG GCAAGTCGTA CAACCCGCTC
TACCTGTACG GCGGCGTTGG CCTCGGCAAG ACTCACCTGA TTCACGCGAT TGGCAACTTC
ATGCTGATGG AGAACCCGCG CGCGCGCATC CGGTACATCC ATGCGGAGCA GTACGTTTCC
GACGTGGTGA AGGCCTACCA GCGCAAGGCG TTCGACGAGT TCAAGCGCTA TTACCACTCG
CTGGACCTGC TGCTGATCGA TGATATTCAG TTCTTCTCCG GCAAGAACCG CACGCAGGAA
GAATTCTTCT ACGCATTCGA GGCGCTGATC GCCAATCGCG CCCAGGTGAT CATCACCAGT
GATACCTATC CGAAGGAGAT CACCGGCATC GACGACCGGC TGATTTCGCG TTTCGACTCC
GGCCTGACTG TGGCGATCGA GCCGCCCGAG CTGGAGATGC GCGTCGCCAT TCTGATGAAG
AAGGCCGCCG CCGAGAACGT GAGCGTGCCC GAGGAAGTGG CCTTCTTCGT GGCCAAGCAC
CTGCGGTCGA ACGTGCGCGA GCTGGAAGGC GCGCTGCGCA AGATCCTGGC GTTCTCGAAC
TTCCATGGCA AGGACATCAC GATCGATGTC ACGCGTGAAG CGCTGAAGGA CCTGCTGACC
GTGCAGAATC GCCAGATCTC CGTGGAGAAC ATCCAGAAGA CCTGCGCAGA TTTCTACAAC
ATCAAGGTCG CGGACATGTA TTCCAAGAAG CGGCCCGCCA ATATCGCGCG GCCGCGCCAG
ATCGCGATGT ATCTGGCGAA GGAACTGACG CAGAAGAGTC TGCCGGAGAT CGGCGAGTTG
TTCGGCGGGC GCGATCACAC CACGGTGCTT CACGCCGTGC GCAAGATTGC CGAAGAGCGT
AGCAAGGACG CGCAGCTCAA TCACGAGTTG CACGTGCTGG AACAGACGCT CAAGGGCTGA
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| Protein sequence | MQDFWQAAAA QLERELTPQQ FKTWIKPLAP VAFDEEAHAL RIAAPNRFKL DWVKSQFSGR
ITALACEYWE TQVSVHFVLD PAASGRAAAY TQQAMQQGQD APAAMGTAMG AGHAPYPGMA
GMAGGQSYGP AGAQVPGAHP NQMAGYPDYP SQSNGAPAGY GGAAGGQTPY SQSQQSAQGR
GAAPTGHPLQ GNSAAHLPDM GEIDVAQMDP AEASARSYRV PSPQPAAPAG AQQQSDTVHE
RSRLNPILTF DNFVTGKANQ LARAAAIQVA NNPGKSYNPL YLYGGVGLGK THLIHAIGNF
MLMENPRARI RYIHAEQYVS DVVKAYQRKA FDEFKRYYHS LDLLLIDDIQ FFSGKNRTQE
EFFYAFEALI ANRAQVIITS DTYPKEITGI DDRLISRFDS GLTVAIEPPE LEMRVAILMK
KAAAENVSVP EEVAFFVAKH LRSNVRELEG ALRKILAFSN FHGKDITIDV TREALKDLLT
VQNRQISVEN IQKTCADFYN IKVADMYSKK RPANIARPRQ IAMYLAKELT QKSLPEIGEL
FGGRDHTTVL HAVRKIAEER SKDAQLNHEL HVLEQTLKG
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