| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2701 |
|---|
| Symbol | |
|---|
| ID | 8569370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 3129684 |
|---|
| End bp | 3130871 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase |
|---|
| Protein accession | YP_003291960 |
|---|
| Protein GI | 268318241 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.13736 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAG TGCTCCAGCA AGAACCGGAA GTGCCGGCGG CCGTGCTGGC GGCTGCCGGC
GAGGCGCCGC GCGTGCTGCT GGCGGGCGGT GGCACCGGGG GCCACGTGTA TCCGGCCATT
GCCATTGCCG AGGCGATCCG GGCGCAGTGC CCGGAGGCGG TGATCGCCTT TGCAGGCACG
CGCGAGCGAC TGGAGTGGCG GGCTGTGCCG GCGGCCGGCT TTCCGATCCA TCCGATCGCG
GCGGCGGCGT TGCCACGCCG GCCTTCGCTT CGCATGCTGC GGGTGCCGGG GAAGTTGGCC
CAGGGCCTGG CCGAAAGCCT GCAGCTCGTT CGGGCGTTCG ATCCGGACGT TGTGGTGGGT
ACCGGTGGCT ACGTGTCGGC ACCGGTGCTT GTGGCGGCCC GGCTCCTGGG GCGTCCCCTT
GTGCTACAGG AGCAGAATGC CTTCCCGGGC CTGACCAACC GGCTGCTGGG GCGGTGGGCC
GCCCGCGTCT ATGTGGCTTT CCCGGAGGCG CAGGCTTACT TTCCGGCCGG CCGGTGCGTG
CTCAGCGGCA ATCCGGTGCG GGCGTCGCTC CGGGCCGTGT CCCGCCTGGA AGCCCGCCGA
CGCTTCGGGC TGCCGGCCGA GGCGCAGGTG CTGTTCGTCT TCGGCGGCTC GCTCGGCAGC
ATGGTGCTCA ACGACGCGCT GCTGCAGGTG CTGCCGACGC TGCTCGAGGA GCCGCGTTTG
CACCTGCTCT GGCAGACGGG CCGGGCGCAC TACATGGCCG TGCGGCAGCG GCTGGACGCG
ATGGCAAAGC AGCTGCACCA TCGGATTCGC CTGCTGCCCT ACATCGAAGA CATGGCGGCG
GCCTATGCCG CGGCCGACCT GGTGCTGTGC CGCGCCGGTG CGCTGACCTG CAGCGAACTC
ATGGTGACCG GCACGCCGGC CATCCTGGTG CCGGCCACGC GCGTGGCGGC CGATCACCAG
ACGCGCAACG CCGAAAGTAT GGAGCGTGCC GGAGCCGCCC GGCACGTACC GGAGGCTGTG
CTGACCGAAC GGCTGGTGCA GGAGGTGTGG ACGCTGCTGG CCGACGCGGA GCTTCGTGCG
GCCATGAGCG AGGCGGCGCG GCGCCTGGCG CGCCCGGAAG CTGCCGCGCA GATTGCCGCC
GACGTGCTGC AACTGGCAAC CGAACGACGG AAACGAAAGG TCGCATGA
|
|---|
| Protein sequence | MSEVLQQEPE VPAAVLAAAG EAPRVLLAGG GTGGHVYPAI AIAEAIRAQC PEAVIAFAGT
RERLEWRAVP AAGFPIHPIA AAALPRRPSL RMLRVPGKLA QGLAESLQLV RAFDPDVVVG
TGGYVSAPVL VAARLLGRPL VLQEQNAFPG LTNRLLGRWA ARVYVAFPEA QAYFPAGRCV
LSGNPVRASL RAVSRLEARR RFGLPAEAQV LFVFGGSLGS MVLNDALLQV LPTLLEEPRL
HLLWQTGRAH YMAVRQRLDA MAKQLHHRIR LLPYIEDMAA AYAAADLVLC RAGALTCSEL
MVTGTPAILV PATRVAADHQ TRNAESMERA GAARHVPEAV LTERLVQEVW TLLADAELRA
AMSEAARRLA RPEAAAQIAA DVLQLATERR KRKVA
|
|---|
| |