| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_2700 |
|---|
| Symbol | |
|---|
| ID | 8569369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 3128248 |
|---|
| End bp | 3129687 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | UDP-N-acetylmuramate/alanine ligase |
|---|
| Protein accession | YP_003291959 |
|---|
| Protein GI | 268318240 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.278778 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAGCC GCGGAAACTG GCGCCGACCG CCCCTGTTCG GGCGGGTTCG CCATGTGCAC
ATGGTGGGCA TCGGCGGCAT CGGCATGAGC TCGATCGCCG AGGTGCTCCT GCTGCGCGGT
TTCCGCGTGA CGGGGTCCGA TCTGAAGCGC AGCGAGATCA CGGAACGGCT GGAGCGACTG
GGGGCCGTCG TCTACGAGGG CCATCGGCCC GAGCACGTGG GCGACGCCGA CGTGGTGGTC
TATTCGTCCG CCGTTCGGCC GCAGGAGAAT CCAGAGACGC TGGAGGCGCT CCGCCGTCGG
ATTCCGCTGA TTCCCCGGGC CGAGATGCTC GGCGAACTGA TGCGCATGAA GTTCGGCATC
GGGGTGGCCG GCACGCACGG CAAGACGACC ACCACCTCGA TGGTAGGACT GGTGGTGTCC
GAAGGCGGGT TCGACCCGAC GATCATTGTG GGCGGCAAGG TGGCCGCCTT CGAGTCGAAC
GCGGTGGCCG GCGAGGGCGA CATCATCGTG ATCGAGGCGG ACGAATACGA CCGCACGTTC
CTGCGGCTGA CGCCCACGCT GGCCGTGGTG ACCAGCATCG AGCCGGAGCA CCTGGACATC
TACCGCGACC TGGACGACCT GATGGCCGCC TTTCGCCAGT TTGCCAGCAG CGTCCCCTTC
TTCGGGGCCG CCATCCTGTG CCTGGACGAT CCGAACGTGC AGGCGCTGGT GGGGCAGCTG
GATCGCCGCG TGCGCACCTA CGGGCTGGCC CGACAGGCGG AGATTCGCGC TGAAAATGTA
CAGTTCGAAG GCTTCGGCTC CCGTTTCGAC GTGCTGCTGC AGGGCGAGCC GCTGGGCACG
ATCCAGCTTC AGGTGCCGGG CCTGCACAAC GTGCGCAACG CGCTGGCGGC CGTGGCCGTG
GGGCTGGAGC TGGATATTCC GTTCGAGGCC ATTCAGGCCG GACTGGCCCG CTTTACGGGC
GTCCGTCGTC GCTTCGAGCG GCTGGGCGAG GTGCACGGCG TGCTGGTCAT CGACGACTAC
GCCCACCATC CCACAGAAAT CCGGGCGACG CTGGAGGCGG CCGCCACGGC CATGCCCGAT
CGGCGGCTGG TGGCCGTCTT TCAGCCGCAC CTGTACAGTC GCACGCGGGA CTTTCAGGAG
GACTTTGCCC GGTCTTTCGT GGATGCCGAC GTGCTGGTGG TGACCGACGT CTACGGCGCC
CGCGAGGCGC CGATTCCGGG GATTACCGGC GAGCGCATTG CCGAGCTGGC CCGGCGTTTC
GGTCACCGCG ACGTGCACTA CGTGCCCGAG CGCCGGCAGA TTCCGGGCTA CCTGCTGGAG
CACGTGCTTC GTCCGGGCGA TGCCGTGCTG TTCATGGGAG CCGGCGACAT CTGGCGGGCC
GCCCGCGAGC TGCTGGACTA CCTGAAACTG ACCGAAGCGT TGCCGCATGC CGCCTCGTAA
|
|---|
| Protein sequence | MISRGNWRRP PLFGRVRHVH MVGIGGIGMS SIAEVLLLRG FRVTGSDLKR SEITERLERL
GAVVYEGHRP EHVGDADVVV YSSAVRPQEN PETLEALRRR IPLIPRAEML GELMRMKFGI
GVAGTHGKTT TTSMVGLVVS EGGFDPTIIV GGKVAAFESN AVAGEGDIIV IEADEYDRTF
LRLTPTLAVV TSIEPEHLDI YRDLDDLMAA FRQFASSVPF FGAAILCLDD PNVQALVGQL
DRRVRTYGLA RQAEIRAENV QFEGFGSRFD VLLQGEPLGT IQLQVPGLHN VRNALAAVAV
GLELDIPFEA IQAGLARFTG VRRRFERLGE VHGVLVIDDY AHHPTEIRAT LEAAATAMPD
RRLVAVFQPH LYSRTRDFQE DFARSFVDAD VLVVTDVYGA REAPIPGITG ERIAELARRF
GHRDVHYVPE RRQIPGYLLE HVLRPGDAVL FMGAGDIWRA ARELLDYLKL TEALPHAAS
|
|---|
| |