Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_2644 |
Symbol | |
ID | 8569313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 3068898 |
End bp | 3070019 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | TRAP dicarboxylate transporter- DctP subunit |
Protein accession | YP_003291904 |
Protein GI | 268318185 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.841176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACGTC GGCGCTTTCT GAAAAAGGCC GCGCTGGGTG CGGCGGCCAC GGCCGTGCTG GCAGGCTGCG GTAATCGACA GACAGACGAA GGCGGCGCGC CCGCCGTGCA GACGCTGCCC CGTCTGCGCT GGCGGCTGGC CTCGAGCTTT CCACGCGGGC TCGACACGAT CTATGGCGCG GCCGAGGTGC TGGCCGAACG CGTACGCGCG CTGACCGACG GCCGCTTCGA GATCCGCGTC TACCCGGCCG GCGAGCTGGT GCCGGGCCTG CAGGTGCTTG ACGCCGTGCA GAACGGCACG GTCCCGATCG GCCACACGGC CAGCTACTAC TTCATCGGCA AGCATCCGGC GCTGGCCTTC GACTGTACGG TACCCTTCGG GCTGACGGCC CGTCAGTACA ACGCCTGGCT GCTCGAAGGC GGCGGCCTGG ACCTGTTGCG TGAGCTGTTC GCCGAGTTCA ACATCGTGAA CCTGCCCGGC GGCAACACGG GCGCCCAGAT GGGCGGCTGG TTCCGACGCG AGATCAACAG CCTGCGCGAC CTGCGCGGCC TGAAAATGCG CATTCCGGGC ATGGGCGGCC GGGTCATGAG TGAGATGGGC GTGACCGTGC AGGTGCTGGC CGGCGGCGAG ATCTACCCGG CGCTGGAACG CGGCGCCATC GACGCGGCCG AGTGGGCCGG TCCCTATGAC GACGAGAAGC TGGGCTTTTA TCAGATCGCA CCCTACTACT ACTACCCGGG CTGGTGGGAG CCCGGCCCGG CGCTGACGTT CTACGTGAAC CGCCGCGAGT GGGAGCGGCT GCCTTCGTTC TACCGGGAGG TGCTCTGGAC GGCTGCGCTG GAGGCCAGCC AGACCATGGT GGCCCGCTAC GACGCCCGTA ACCCGGCGGC CCTGCAACGC CTGCTGCAGG CCGGCGTGCA GCTCCGGCGC TTCCCGGACG ACGTGCTGCG CGAAGCCGCC CGCATCGCCG AAGAACTGCT CGGTCAGGAG CAGGACCCGC TCTACCGTAA AATCTACGAA GCCTACCGCA AGTGGCGGGC ACAGAGCTAT CGCTGGTTCG GCACCACGGA GCTGGCCTAT GCGCAGTTTG CCTTCCAGCT ACCCTCCTTC CTCGAAGTCT GA
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Protein sequence | MERRRFLKKA ALGAAATAVL AGCGNRQTDE GGAPAVQTLP RLRWRLASSF PRGLDTIYGA AEVLAERVRA LTDGRFEIRV YPAGELVPGL QVLDAVQNGT VPIGHTASYY FIGKHPALAF DCTVPFGLTA RQYNAWLLEG GGLDLLRELF AEFNIVNLPG GNTGAQMGGW FRREINSLRD LRGLKMRIPG MGGRVMSEMG VTVQVLAGGE IYPALERGAI DAAEWAGPYD DEKLGFYQIA PYYYYPGWWE PGPALTFYVN RREWERLPSF YREVLWTAAL EASQTMVARY DARNPAALQR LLQAGVQLRR FPDDVLREAA RIAEELLGQE QDPLYRKIYE AYRKWRAQSY RWFGTTELAY AQFAFQLPSF LEV
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