Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_2502 |
Symbol | |
ID | 8569168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 2909258 |
End bp | 2910562 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_003291767 |
Protein GI | 268318048 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.732616 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGTCCA TGACTCGCCG CGTCTCGCAA GCCCGGAGTC TGCTGGGTGT CGTCGAGCTG CCCCCGGACA AGTCCATCGC CCACCGGGCG GCCCTGCTGG CCGCCCTGGC CGACGGCACC TCGCGTCTGG TGAACTACTC GCCGGCCGCC GATCCGCAAT CGACGCTCTC GTGCCTGCGC CAGCTCGGCG TGCCCATCTA CGAAGACGAG CATGGCATCC TGGTCGTCGA AGGCCGTGGA CTGGAGGGCC TGCAGGCACC GGACCGCCCG CTCGACTGCG GCAACTCGGG CACCACCATG CGTCTGCTGG CCGGCATCCT GGCCGGACAA CCCTTCGACA GCGTACTGGT AGGCGACGCC TCGCTCAGCC GCCGCCCCAT GGAACGCATC GCCACGCCGC TACGCCAGAT GGGCGCCGAG CTGACGCTCA CCGACGGCCA CGCGCCCATC CATATCCGGG GTGGTCGTAC ACTGCGGGGC ATCACCTACC GGCTGCCTGT GCCGTCGGCT CAGGTCAAGT CGTGCGTGTT GCTGGCCGGA CTGTTTGCCG AGGGCGAGAC GACCGTCATC GAGCCGATCC CTTCCCGTGA CCACACCGAG CGTATGCTGG GCCTGAGCGT GGTGGAACTG AACGGCGAGC GTTACCTGAC CGTCCGGGGC GGCATGCGCA TCCCGGCCCG CACCTGGACG ATCCCGCGCG ACTTCTCGGC GGCCGCTTTC TTTCTGGTGG CCGGCACGAT CGTACCCGAC AGCGAGATTC GCCTGCCCGG GGTGGGACTC AACCCGTCGC GCTCGGCGTT GCTCGACGTG CTGCGGGCCA TGGGCGCCGA CATCACCGTC GAAAACGAGC GAAGCTACGG CGGCGAGCCC ATTGCCGACC TGGTCGTGCG AAGCAGCACG CTGCACGGCG TGCAGGTGGG CGGCGCCATC ATTCCGAACC TGATCGACGA GATCCCCGTG CTGACCGTGG CGGCCGCCTG CGCCACCGGT CGCACCGAGA TCCGGGACGC CGCCGAGCTG CGCGTCAAGG AAACCGACCG CATCGCAGCC ATGGCCGAAA ACCTGCAGGC GCTGGGCGCC CGCGTCGAGG TGTTCGACGA CGGCCTGGCC ATCGAAGGGG GCCATCGGCT CCGGGGAACG ACCGTTCGGA GCTTCGACGA TCACCGCATC GCCATGGCGA TGGGCGTGGC CGGACTGGTG GCCGAAGGCG AGACGATCAT CGAAGGCGCC GAATGCGCCC GTATCTCGTT CCCCGGCTTC TGGGAGGTGC TCGACCGCCT GGCCGGCCGC CCGGTTGCGG TGTGA
|
Protein sequence | MLSMTRRVSQ ARSLLGVVEL PPDKSIAHRA ALLAALADGT SRLVNYSPAA DPQSTLSCLR QLGVPIYEDE HGILVVEGRG LEGLQAPDRP LDCGNSGTTM RLLAGILAGQ PFDSVLVGDA SLSRRPMERI ATPLRQMGAE LTLTDGHAPI HIRGGRTLRG ITYRLPVPSA QVKSCVLLAG LFAEGETTVI EPIPSRDHTE RMLGLSVVEL NGERYLTVRG GMRIPARTWT IPRDFSAAAF FLVAGTIVPD SEIRLPGVGL NPSRSALLDV LRAMGADITV ENERSYGGEP IADLVVRSST LHGVQVGGAI IPNLIDEIPV LTVAAACATG RTEIRDAAEL RVKETDRIAA MAENLQALGA RVEVFDDGLA IEGGHRLRGT TVRSFDDHRI AMAMGVAGLV AEGETIIEGA ECARISFPGF WEVLDRLAGR PVAV
|
| |