Gene Rmar_2502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2502 
Symbol 
ID8569168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2909258 
End bp2910562 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content69% 
IMG OID 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_003291767 
Protein GI268318048 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.732616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTCCA TGACTCGCCG CGTCTCGCAA GCCCGGAGTC TGCTGGGTGT CGTCGAGCTG 
CCCCCGGACA AGTCCATCGC CCACCGGGCG GCCCTGCTGG CCGCCCTGGC CGACGGCACC
TCGCGTCTGG TGAACTACTC GCCGGCCGCC GATCCGCAAT CGACGCTCTC GTGCCTGCGC
CAGCTCGGCG TGCCCATCTA CGAAGACGAG CATGGCATCC TGGTCGTCGA AGGCCGTGGA
CTGGAGGGCC TGCAGGCACC GGACCGCCCG CTCGACTGCG GCAACTCGGG CACCACCATG
CGTCTGCTGG CCGGCATCCT GGCCGGACAA CCCTTCGACA GCGTACTGGT AGGCGACGCC
TCGCTCAGCC GCCGCCCCAT GGAACGCATC GCCACGCCGC TACGCCAGAT GGGCGCCGAG
CTGACGCTCA CCGACGGCCA CGCGCCCATC CATATCCGGG GTGGTCGTAC ACTGCGGGGC
ATCACCTACC GGCTGCCTGT GCCGTCGGCT CAGGTCAAGT CGTGCGTGTT GCTGGCCGGA
CTGTTTGCCG AGGGCGAGAC GACCGTCATC GAGCCGATCC CTTCCCGTGA CCACACCGAG
CGTATGCTGG GCCTGAGCGT GGTGGAACTG AACGGCGAGC GTTACCTGAC CGTCCGGGGC
GGCATGCGCA TCCCGGCCCG CACCTGGACG ATCCCGCGCG ACTTCTCGGC GGCCGCTTTC
TTTCTGGTGG CCGGCACGAT CGTACCCGAC AGCGAGATTC GCCTGCCCGG GGTGGGACTC
AACCCGTCGC GCTCGGCGTT GCTCGACGTG CTGCGGGCCA TGGGCGCCGA CATCACCGTC
GAAAACGAGC GAAGCTACGG CGGCGAGCCC ATTGCCGACC TGGTCGTGCG AAGCAGCACG
CTGCACGGCG TGCAGGTGGG CGGCGCCATC ATTCCGAACC TGATCGACGA GATCCCCGTG
CTGACCGTGG CGGCCGCCTG CGCCACCGGT CGCACCGAGA TCCGGGACGC CGCCGAGCTG
CGCGTCAAGG AAACCGACCG CATCGCAGCC ATGGCCGAAA ACCTGCAGGC GCTGGGCGCC
CGCGTCGAGG TGTTCGACGA CGGCCTGGCC ATCGAAGGGG GCCATCGGCT CCGGGGAACG
ACCGTTCGGA GCTTCGACGA TCACCGCATC GCCATGGCGA TGGGCGTGGC CGGACTGGTG
GCCGAAGGCG AGACGATCAT CGAAGGCGCC GAATGCGCCC GTATCTCGTT CCCCGGCTTC
TGGGAGGTGC TCGACCGCCT GGCCGGCCGC CCGGTTGCGG TGTGA
 
Protein sequence
MLSMTRRVSQ ARSLLGVVEL PPDKSIAHRA ALLAALADGT SRLVNYSPAA DPQSTLSCLR 
QLGVPIYEDE HGILVVEGRG LEGLQAPDRP LDCGNSGTTM RLLAGILAGQ PFDSVLVGDA
SLSRRPMERI ATPLRQMGAE LTLTDGHAPI HIRGGRTLRG ITYRLPVPSA QVKSCVLLAG
LFAEGETTVI EPIPSRDHTE RMLGLSVVEL NGERYLTVRG GMRIPARTWT IPRDFSAAAF
FLVAGTIVPD SEIRLPGVGL NPSRSALLDV LRAMGADITV ENERSYGGEP IADLVVRSST
LHGVQVGGAI IPNLIDEIPV LTVAAACATG RTEIRDAAEL RVKETDRIAA MAENLQALGA
RVEVFDDGLA IEGGHRLRGT TVRSFDDHRI AMAMGVAGLV AEGETIIEGA ECARISFPGF
WEVLDRLAGR PVAV