Gene Rmar_2488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2488 
Symbol 
ID8569154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2898564 
End bp2899865 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003291753 
Protein GI268318034 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCCA CGGCGCTCAT CCTGCTGTCG GTACTGCTCG TGGCCTGCGA GCGGCCGTTC 
GTACCGGTGC GCACGCCGGA GATCAAGGTG GTGGCGCCGG ATCTGTCGGA GGTGCAGATC
GACTCGACGC TGACGCTTCA GGTGCGGGCC ACGTCGTTTC GGGCCATTGC CCACGTGGAC
GTCGAAGGGC GGCCGCTTCG CTACGACAGC CTGCGCGACA TGTGGCGGGG CAGCGTCCCC
CTGCGCTACG GTCTGAACCG CCTGCGCATT ACGGCCGTGG ACGAAAAAGG CGTGTCCGCC
ACCGACACGG CCTGGGCACT GCGTCTGCAG GCTACGGTGC TACCGGGACC ACCGCTCCCC
GACGGCCGCG GCGGCGGCCG CCTGGTGCGC CTGCCCGACG GACGGCTGCT CTTTGCGGGC
GGTGCCGAGG TGTGGACCGG CCCGGCCGGC CGCGACCTGT TCGTCTGGGT GCCCGGTGCG
CCCGTGTTCG AGCGTCTGCG TCCCGGCCTG AGCGCTCCCC GCGCCGGCCA CACGGCCACA
CTGCTGCCCG ACGGCCGCGT GCTGCTGCTG GGCGGCGGCA CCCAGGGGCG CCCCGAGCTG
GCCAACAACC TGCGCACCGA CGCCGAACTG GTCGATCTGG CCGCCGAAAC CCGCCGGCTG
CTGCCCCTCG CGATCGGAGC CGCCCGTGCC TGGCACACGA CGGCGCTCCG ACAGTACGAG
GGCCGACGCT TTCTGGAGGT GCTGGGCGGC TACCGCCGGC TGCGTGGCGA TTCGCCCGAG
CTGGGCGTGG CGGCCGACCT GATCACCTTC GAGCTGCGGG ACGACTCGCT CGTGCTGCTG
ACGCCCGGCC TGGGCCTCTA CATCACGCCG CTGGCTGCGC ACGTCATGGC CCCGCTCGAT
GCAGCCGGCA CACGCTTCCT GGTGGCCGGC GCGCTGGCGA CGCCGGACTA CGTCAAGACA
CAGACATTTC GGCTCGTGCT GGAACCGGCC GGCCGCGTCG ATACGCTGCT TGTGCCCGCA
CTGCCCGAGC CGCGCCAGTT TGCCACCGCC GCCCCGCTTC GTCCCGGCGT CGTGGTGCTG
CTGGGCGGCT ATGCCGGACA GCTATCGCGA ACCTACCCCT ACCCGCTCCT GTACGTAGAG
GAGGCCAACC GCTTTTTCCG CTTCCGTGCG TTGCTCCTGC AGCCCCGCTT CGACGCCGCT
GCAACTTCGC TCGAAGATTT TCGAATACTG ATAACAGGCG GCTTCGGCCC CGACGGGCAG
GGGCTTGCCT GGACCGAAGT GGTGGCCTTT GCGCCGTTTT GA
 
Protein sequence
MKPTALILLS VLLVACERPF VPVRTPEIKV VAPDLSEVQI DSTLTLQVRA TSFRAIAHVD 
VEGRPLRYDS LRDMWRGSVP LRYGLNRLRI TAVDEKGVSA TDTAWALRLQ ATVLPGPPLP
DGRGGGRLVR LPDGRLLFAG GAEVWTGPAG RDLFVWVPGA PVFERLRPGL SAPRAGHTAT
LLPDGRVLLL GGGTQGRPEL ANNLRTDAEL VDLAAETRRL LPLAIGAARA WHTTALRQYE
GRRFLEVLGG YRRLRGDSPE LGVAADLITF ELRDDSLVLL TPGLGLYITP LAAHVMAPLD
AAGTRFLVAG ALATPDYVKT QTFRLVLEPA GRVDTLLVPA LPEPRQFATA APLRPGVVVL
LGGYAGQLSR TYPYPLLYVE EANRFFRFRA LLLQPRFDAA ATSLEDFRIL ITGGFGPDGQ
GLAWTEVVAF APF