Gene Rmar_2249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2249 
Symbol 
ID8568913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2613092 
End bp2614378 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content68% 
IMG OID 
Productisocitrate lyase 
Protein accessionYP_003291516 
Protein GI268317797 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.44014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCAAC CGATTGCCGC TGTCAAAGCC GCCCGTCTCG AAGCCGAATG GCGCTCCAAT 
CCCCGATGGG CCGGGATCCG CCGACCCTAC GCCGCCGAAG ATGTGCTCCG CCTTCGCGGT
TCGGTCGAAA TCGCCTATAC GCTGGCCGAC CGCGGCGCCC GGCGCCTCTG GGAACTGCTC
CACACCGAAC CCTACGTGGC CGCGCTCGGC GCCCTGACCG GCAACCAGGC CATGCAACAG
GTCAAAGCCG GACTCAAGGC CATCTACGTC AGCGGCTGGC AGGTGGCCGC CGACGCCAAC
CTGGCCGGTC AGATGTACCC CGACCAGAGC CTCTACCCCT CCAACAGTGT CCCGGCCCTC
GTGCGCCGCA TCAACAACAC GCTGCTGCGC GCCGACCAGA TTCACCATGC CGAAGGCGAC
GACTCGATCG ACTGGCTCGT GCCCATCGTG GCCGACGCCG AGGCCGGCTT CGGCGGCCCG
CTCCATGCCT TCGAGCTGAC CAAGGCGCTC ATCGAAGCCG GTGCCGCCGG GGTCCACTTC
GAGGACCAGC TCGCCTCCGA AAAGAAATGC GGCCACCTGG GCGGCAAGGT GCTCGTCCCC
ACCGGCCAGT TCATCCAGAC GCTGGTCGCC GCCCGCCTGG CCGCCGACGT CATGGGCGTG
CCCACCATCA TCATCGCCCG CACCGACGCG AACGCCGCCA CGCTGCTCAC CAGCGACATC
GACGAGCGGG ACCGTCCCTT CCTCACCGGC GAACGCACGC CCGAGGGCTT CTTCCGCGTC
CGGGCCGGGC TCGATCAGGC CATCGCCCGC GCCCTGGCCT ACGCGCCCTA CGCCGACATG
ATCTGGTGCG AGACGTCCAC GCCCGACCTG GACGAGGCCC GGCGCTTCGC CGAAGCCATC
CACCGCGAAT ACCCCGGCAA ACTGCTGGCC TACAACTGCT CGCCGTCGTT CAACTGGAAA
AAGCACCTCG ACGAGGCCAC CATTGCCCGT TTCCAGCGGG AGCTGGCCGC GATGGGCTAC
AAGTTCCAGT TCATCACGCT GGCCGGCTTC CACACGCTCA ACTACGCCAT GTTCGAACTG
GCCTACGACT ATGCGCGCGA AGGCATGCCG GCCTACGTGC GCCTGCAGCA GAAGGAGTTT
GCCGCCATGG AGAAGGGCTT TACGGCCGTG CGGCATCAGC GCGAGGTGGG CACCGGCTAC
TTCGACGCCG TGCGGACGGT GATCACCGGT GAGCAGGCCA GCACGGTGGC CCTGGCCGGT
TCCACCGAGG CGCAGCAGTT CCACTGA
 
Protein sequence
MRQPIAAVKA ARLEAEWRSN PRWAGIRRPY AAEDVLRLRG SVEIAYTLAD RGARRLWELL 
HTEPYVAALG ALTGNQAMQQ VKAGLKAIYV SGWQVAADAN LAGQMYPDQS LYPSNSVPAL
VRRINNTLLR ADQIHHAEGD DSIDWLVPIV ADAEAGFGGP LHAFELTKAL IEAGAAGVHF
EDQLASEKKC GHLGGKVLVP TGQFIQTLVA ARLAADVMGV PTIIIARTDA NAATLLTSDI
DERDRPFLTG ERTPEGFFRV RAGLDQAIAR ALAYAPYADM IWCETSTPDL DEARRFAEAI
HREYPGKLLA YNCSPSFNWK KHLDEATIAR FQRELAAMGY KFQFITLAGF HTLNYAMFEL
AYDYAREGMP AYVRLQQKEF AAMEKGFTAV RHQREVGTGY FDAVRTVITG EQASTVALAG
STEAQQFH