Gene Rmar_2227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2227 
Symbol 
ID8568891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp2590164 
End bp2590817 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content64% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003291494 
Protein GI268317775 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.632961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC GGATCCTGAT CGTCGACGAT CATCCGCTCG TGCGCAAAGG GCTGGCGCTG 
ACGCTCGAGG CCGAGCCCGA TCTGGAGGTA TGCGGACAGG CCGCTTCGGC CGAGGAGGCG 
CTCGGGATGC TGGATGAAGT CCGGCCCGAT CTGGCCATCG TGGACATCTC GCTGCCGGGC 
ATGAGCGGGC TGGAGCTGAT CAAACACCTG CATGCCTGGA ATCCGGATTT GCCCGTGCTG 
GTCATTTCGC GACATGACGA AGCACTCTAT GCAGAGCGGG CCATTCGGGC CGGCGCGCGC 
GGCTACGTGA TGAAAATCGA GGCGGTCGAT GTGATCGTCA AAGCCGTGCG GCGCGTGCTG 
GCCGGAGGGC TCTACGTGAG CCAGGAGGTC AGCGAGCGGC TGCTGATGAG CATGACCGGT 
CACCGGCGCA CGACCGGCCA GTCGCCCATG GAACTGCTCA GCGACCGGGA GCTGGAAGTG 
TTCGAGTTGA CGGGGCAGGG CCTCAGCACG CGGGAGATCG CCGAGCGACT GCATCTTTCG 
GTCAAAACCG TCGAATCCTA TCGGGCACGC ATCAAGGCCA AGCTGGGGCT TCGGACGGCG 
GCCGAGCTCA TGCAGCACGC GGTTCAGTGG GTCGAAAACG AGCGTTCGGG CTGA
 
Protein sequence
MKKRILIVDD HPLVRKGLAL TLEAEPDLEV CGQAASAEEA LGMLDEVRPD LAIVDISLPG 
MSGLELIKHL HAWNPDLPVL VISRHDEALY AERAIRAGAR GYVMKIEAVD VIVKAVRRVL 
AGGLYVSQEV SERLLMSMTG HRRTTGQSPM ELLSDRELEV FELTGQGLST REIAERLHLS 
VKTVESYRAR IKAKLGLRTA AELMQHAVQW VENERSG