Gene Rmar_2083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2083 
Symbol 
ID8568742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2428860 
End bp2429879 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content64% 
IMG OID 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_003291352 
Protein GI268317633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAGC CTGACTGGAC ACTGCTGGCC CGTTACCTGG AGGGAACGAC TACGCCAGAA 
GAGCGCGCGC GTGTGGAGGC CTGGTGTGCG GCCGACCCTG CGCATCGTGC CCTGCTGAAG
CGTCTGGAGG TGATCTGGCG GACGCCGCCT GCTCGGCCAG GGGCCTGGGA TGCCGAAGCT
GCCTGGCTGC AAGTCGCACG TCAGGTGCGT GCAGCAGGGA CGGGGCGGCC ACCACGCAGG
TCGCGGCGTC GCAAGCTTCC TTATGGAGTG CGTGTTGCGC TGGTACTGGT GCTGTTGCTG
ATTCCGCTGG GGGTGTTGCT CTGGCGGATG ACCTCGCCCG CGCCGTCCCG GGTCGCCGAA
GTGGTTACCT GGGATTCATG GCGGACGACC ACCGGCGAGC AGAAGATTCT GCGGCTGGCG
GACGGCACGC GGATCTGGAT GGCGCCCGAA AGTCAGGTAG AGGTGCAACA ACCGTATATG
CAGCATCGCA CGTTGCGGGT GCGGGGGGAA GTTTACGTGG AAGTGGCCGA GGCGTCCGGC
GTGCGTCTGC TGGCCGGGCC GGTAACCATT CGGGATATTG GCACCCGATT TCTGGTCCGC
GCCGATCATC CGGAGGCGTT GGTGCAGGTA GTGGTCGAGG AAGGATTGGT AGCGATGCAG
GCGGCTGCAA GGGCCGACTC GCTGGTGGTT GCGGCGGGTA TGCTTGGGCG ATACGATGCG
CAGCAATCGC GGCTGCGGGT TCTTCGTCTG TCCGACCAGG ATTTGCGCGC GTATTTCTCC
TGGATGCAGG GGACGCTGGT GTTTCAGACG GCCTCGCTCG AGGAGGTGCA GCGCCAGCTA
TTACGCTGGT TCGGCGTACA CTTCGTTTTT CCGCCCACGC ATCGACAGGC CCATCTAACC
GCGAGTTTTC AGCTCAGGCA ACCCATTGCG GAAATAGCCG AGGCAATAGG GCTGGCGCTT
CACCTGCGGC CACTTGCCCG GGGAGATTCG ATCATCTTTC AACCGACCCA ACCAGAGTAA
 
Protein sequence
MQQPDWTLLA RYLEGTTTPE ERARVEAWCA ADPAHRALLK RLEVIWRTPP ARPGAWDAEA 
AWLQVARQVR AAGTGRPPRR SRRRKLPYGV RVALVLVLLL IPLGVLLWRM TSPAPSRVAE
VVTWDSWRTT TGEQKILRLA DGTRIWMAPE SQVEVQQPYM QHRTLRVRGE VYVEVAEASG
VRLLAGPVTI RDIGTRFLVR ADHPEALVQV VVEEGLVAMQ AAARADSLVV AAGMLGRYDA
QQSRLRVLRL SDQDLRAYFS WMQGTLVFQT ASLEEVQRQL LRWFGVHFVF PPTHRQAHLT
ASFQLRQPIA EIAEAIGLAL HLRPLARGDS IIFQPTQPE