Gene Rmar_2069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2069 
Symbol 
ID8568728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2408418 
End bp2410937 
Gene Length2520 bp 
Protein Length839 aa 
Translation table11 
GC content68% 
IMG OID 
Productglycoside hydrolase family 3 domain protein 
Protein accessionYP_003291338 
Protein GI268317619 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCACC TTGTTACGAC GCTGCTCTTC GGGCTGGTTT TTGCCGCGGC CGTGCGGGCG 
CAATCGTCCC GCGTGGATTC GTTGCTGGCG GCCATGACGC TGGCCGAAAA AATCTCGTTG
CTGCACGGGG CGATCGACCC GACCGGCGAG GCGGGCGCCG GGTATGTGCC CGGCGTACCC
CGCCTGGGCA TTCCGGCGAT GCGGCTGACC GACGGCCCGG CCGGCATTCG CACGCGCCAT
CCGGCCACGG CGCTTCCGGC CCCGGTCGCA CTGGCTGCTT CGTTCGATCC CGAGCTGGCC
TATCGCTACG GCCACGTGAT GGGCATTGAA GGCCGGGCAC GCCGGCATGA GGTGCTGCTT
TCCCCCATGG TCAACATCGT GCGCGTGCCC GAGGCGGGCC GCAATTTCGA GACGTTCAGC
GAAGACCCGC TGCTTTCGGC CGAGATGGTG GCCGCCGAGG TGCGGGGGAT CCAGGACGCC
GGCATGATGG CCACGGTCAA GCACTACGTG GCCAACAACT TTGAAAACGA TCGAATGCGG
GTGAACGTGG TGGTGGACGA GCGCACGCTC AGGGAGATCT ACCTGCCGGG CTTCGAGGCG
GCCATCAAAG CAGGCGCGGC GGCCGTCATG TGCGCCTACA ACCGGGTGAA CGGCCCCTAC
GCCTGCGATA ATGAAATGCT GCTGACGGAC ATCCTGCGCG ACGAGTGGGG CTTCGAGGGC
TGGGTAATGA CGGACTGGTT CGCCGGGCAC AGCCTGGAAT CGCTCGTGCG CGGGCTGGAT
CAGGAAATGC CGGGCTACAC GATTCCGTTC AGCTCGCCCG ACATGCCGCT GGCACCGGCC
GTCTTCGCCG ATTCACTCCT GGCAGCCGTC GAGTCCGGGC GGATCGACGA GGCCTACGTG
GATCGGGCGG TGCGACGCAT TCTGGTGCAG ATGGAGCAGT TCGGGTTGCT GGATGGCGAA
TCGACTCCGC CGGAGATCAA CATCGAAGCG CATGCGGCCG TCGCGCGCGA GGTGGCCGAA
GCCGGAGCCG TGCTGCTCCG CAACGAAAAC CAGACGCTGC CGCTGAGCGA ACGTGATCTG
CAGCACCTGG TCGTGATCGG CCCCACGGCT ACGCGGCCGC TTATCGGTGG GGGTGGTAGC
TCCCGCGTGC AGCCTTTCCG CACCACGTCC ACGCTGGCGG CGCTTCAGGA ACTGGCCGGG
CCACAGGCAC AGATTCGTTA CGTGCCAGGC ATCGACCTCG ACGGCATGCC GGTGCCCTCC
TCGGCCCTCC GGACGCCCGA TGGGCAGCCG GGACTCCTCC GCCAGGGCGC CGACGGTACG
ACGCAGGTCG ACGCCCAGCT CGACTTTACC GGCGAGCGGG CGCTGCCACC CGGTTCGCAG
TGGACCTGGA CCGGCACGCT GACGGCACCG ACCGCCGGCG TCTATGAACT CAAACTGCAG
ACGGCCGGGG GCGTCGGCAC GCTGTCGATC GACGGCCAGC CGGTGTTGCG TACGGGCATG
TTCTTCAGCG ATGCCAGCCT GATCCCGACG GCCGACAGCC TGGAAAACGC CACCTATCGA
ATCGAGCTGC AGGCCGGGCA GCAGCTCTCG CTGACGGTGC AGATCTCGGG CCAGGTGCCG
TCGCTGCCGT TCCTGCCGGC CGGACAGAAT CCGGTGCAGG TGCGGCTGGC CTGGGTGACG
CCGGAGCGGC GGGCGGCCTT CCTGGAGGAA GCGGCAGAGG CCGCCCGCGC GGCGCACGCG
GCAATCGTGT TCGTCTATGA AGAAGGAACC GAGGGGCGCG ACCGGGAGAC GCTGGCCCTG
CGCCCGGACC AGGATGCGCT GGTCGAGGCC GTGGCGGCGG CCAATCCGCG AACGACGGTG
GTGATGAACG TAGGGGCGCC CACGCTGATG CCCTGGGCCG AGCGCGTCGG TGCGATCCTG
CTGATGTGGT ATCCGGGACA GGAAGGCGGA TGGGCCACGG CCGACGTGCT GCTCGGCCGC
GCCAATCCGG CGGGACGGTT GCCCGTCACG TTCCCGCGTC GCGCCGAAGA TGCGCCGACG
GCTTCGCCGG AGCGCTACCC GGGCGTGGAT CTGACGGCGC GCTACGATGA GGGCATCTTC
GTAGGGTACC GCTGGTACGA CGCGCAGCAG ATCGAACCGC TGTTCCCCTT CGGCCACGGA
CTTTCCTACA CGACCTTCGC CTACGAGAAC CTGCGCGTCG AGCCCGACGG CGACGGCTTC
GTCGTGCGCT TCGTGGTGCG CAACACGGGT GATCGGGCCG GCAGCGACGT GCCCCAGGTC
TATCTGGGGC CGCCGGAAAA TCCGCCCGTG CCCATGGCCG TGCGTCAGCT GGTGGGCTTC
CGGCGCGTGA CGCTCGCGCC CGGCGAGGCG CAGGAGGTGA CCGTGCGCAT CGACGGCCGC
GCGCTTTCGT ACTGGTCGGT CGAAGACCAT GCCTGGGTGA AGGCCACCGG ACGCCGGACG
CTTTACGTGG GCGCTTCGGC GCGCGACCTG CGGTTGCAGA CGGAAATCGA CGTGCAGTAG
 
Protein sequence
MKHLVTTLLF GLVFAAAVRA QSSRVDSLLA AMTLAEKISL LHGAIDPTGE AGAGYVPGVP 
RLGIPAMRLT DGPAGIRTRH PATALPAPVA LAASFDPELA YRYGHVMGIE GRARRHEVLL
SPMVNIVRVP EAGRNFETFS EDPLLSAEMV AAEVRGIQDA GMMATVKHYV ANNFENDRMR
VNVVVDERTL REIYLPGFEA AIKAGAAAVM CAYNRVNGPY ACDNEMLLTD ILRDEWGFEG
WVMTDWFAGH SLESLVRGLD QEMPGYTIPF SSPDMPLAPA VFADSLLAAV ESGRIDEAYV
DRAVRRILVQ MEQFGLLDGE STPPEINIEA HAAVAREVAE AGAVLLRNEN QTLPLSERDL
QHLVVIGPTA TRPLIGGGGS SRVQPFRTTS TLAALQELAG PQAQIRYVPG IDLDGMPVPS
SALRTPDGQP GLLRQGADGT TQVDAQLDFT GERALPPGSQ WTWTGTLTAP TAGVYELKLQ
TAGGVGTLSI DGQPVLRTGM FFSDASLIPT ADSLENATYR IELQAGQQLS LTVQISGQVP
SLPFLPAGQN PVQVRLAWVT PERRAAFLEE AAEAARAAHA AIVFVYEEGT EGRDRETLAL
RPDQDALVEA VAAANPRTTV VMNVGAPTLM PWAERVGAIL LMWYPGQEGG WATADVLLGR
ANPAGRLPVT FPRRAEDAPT ASPERYPGVD LTARYDEGIF VGYRWYDAQQ IEPLFPFGHG
LSYTTFAYEN LRVEPDGDGF VVRFVVRNTG DRAGSDVPQV YLGPPENPPV PMAVRQLVGF
RRVTLAPGEA QEVTVRIDGR ALSYWSVEDH AWVKATGRRT LYVGASARDL RLQTEIDVQ