Gene Rmar_2061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2061 
Symbol 
ID8568719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2398927 
End bp2400255 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content67% 
IMG OID 
Productsigma54 specific transcriptional regulator, Fis family 
Protein accessionYP_003291330 
Protein GI268317611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGAG AAGCCATTCA GCAACGCTTT GGGATCGTCG GGCAATCGGC GGCCATCCGG 
AACGTGATCG ACCGCGCCCG GATGGTCGCC CGCACGGACA TCACCGTGCT GCTGCAGGGC
GAAAGTGGCG TGGGCAAAGA GCTGATCGCG CATGCCATTC ACGGGATGAG TCCGCGCCGC
CACGGGCCCT TCGTGATCGT CAACTGCGGG GCGATTCCGG AGGGCCTGAT CGAATCCGAG
CTGTTCGGTG CCGAAAAGGG CGCCTACACC GGCGCCGTCG AGCGCCGCAA GGGGTACTTC
GAAGAGGCCG ACGGCGGCAC CATCTTTCTG GATGAAATCG GCGAGATGCC GCTGGCCGCC
CAGGTGCGGC TGCTGCGCGT GCTGGAGACC GGAGAGTTCA CGCGGGTGGG CTCCAGCCGT
CCCATCAAAA CCGACGTGCG TATCATTGCG GCGACGAACA AGGACCTGGC GAAGGCCGTC
CGCGCCGGAC ACTTTCGGGA GGATCTGTAC TACCGCATCA GCACGGTCAT CATCGAGATT
CCGCCGCTGC GCGAGCGCCG CGAAGACATC ATCCCGCTGT TTGAATACTT CCTGCACCGG
GCGGCCCAGC GCTACGGCAC ACCGCTACGC CGGCTGGACG AAAGCGCCCG CCAGCTGCTG
CTCCGCTACC ACTGGCCGGG CAACGTGCGC GAGCTGCGCA ACGTGGCCGA GCAGGTGGCC
GTGCTCCTGA CTAAGACCAC CATCACGGCC GAAGACCTGC GGCCACTGCT GCGGGGCGTG
AGTGCCGGCC GTAGCCTGAT GCCGGTCAGC CGCGCGTCGG AGCACGGCGG CGATCCCCGG
GAACGCGAGC TGATCTACCG GTTGCTGCTG GAGCTCCGGC TCGACATGCA CGAGATCAAG
GCGCTGCTGC ATCGGCTGGT CTCCGGCCAG GTGCGGCGGC CCGAGCAGCT CCCGGCTCCG
TCCGAAGAAC CGGCCTTCCG CCCGTCGCCT TCCTGGACGG AGGCCGAGGA TGTGGACTTC
GTGGAAGACG TTCCCTTCGA AGAGGAGCTG GACTTCGAGC CGGTCGAAAC GCCCGATCGG
TGGGAGCCGG AGCCGGAAAA CCGGGCGGAA GCGTCCACCG ACCGGAGCGA GCAGAAAACG
GCCGAGCAGT CATCGGCTTC CGGCCTGCTG AACGGCGAAC GGTTGCCCAC GCTGGCCGAG
GCCGAGCGCA TGCTGATCGT CGAGGCGCTC AAACGCTACG GCGGCAACCG GCGGCAGGCC
GCCCGGGCGC TGGGCATCAG CGAGCGTACC CTTTACCGCA AGCTGAAGGA GATCGATGAG
GCGCTGTAA
 
Protein sequence
MDREAIQQRF GIVGQSAAIR NVIDRARMVA RTDITVLLQG ESGVGKELIA HAIHGMSPRR 
HGPFVIVNCG AIPEGLIESE LFGAEKGAYT GAVERRKGYF EEADGGTIFL DEIGEMPLAA
QVRLLRVLET GEFTRVGSSR PIKTDVRIIA ATNKDLAKAV RAGHFREDLY YRISTVIIEI
PPLRERREDI IPLFEYFLHR AAQRYGTPLR RLDESARQLL LRYHWPGNVR ELRNVAEQVA
VLLTKTTITA EDLRPLLRGV SAGRSLMPVS RASEHGGDPR ERELIYRLLL ELRLDMHEIK
ALLHRLVSGQ VRRPEQLPAP SEEPAFRPSP SWTEAEDVDF VEDVPFEEEL DFEPVETPDR
WEPEPENRAE ASTDRSEQKT AEQSSASGLL NGERLPTLAE AERMLIVEAL KRYGGNRRQA
ARALGISERT LYRKLKEIDE AL